RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CROCCQ5TZA2 2017 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 A0A0A6YYC8 382 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 TRAV17A0A0B4J275 112 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 I3L1I5 382 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 SYF2O95926 243 aaKnown RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 AP2B1P63010 937 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 NDUFA9Q16795 377 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 ZNF324BQ6AW86 544 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 FAAH2Q6GMR7 532 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 TTC27Q6P3X3 843 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 TMEM205Q6UW68 189 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 CYHR1Q6ZMK1 362 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 ZC3H7AQ8IWR0 971 aaKnown RBP16.86■□□□□ 0.29
SSBP1-215ENST00000612337 LMNTD2Q8IXW0 634 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 SIRT6Q8N6T7 355 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 ZNF700Q9H0M5 742 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 ABCF3Q9NUQ8 709 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 PLA2G3Q9NZ20 509 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 COMMD10Q9Y6G5 202 aa16.86■□□□□ 0.29
SSBP1-215ENST00000612337 CPAMD8Q8IZJ3 1885 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 H7BY64 318 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 KIF5CO60282 957 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 WFS1O76024 890 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 STSP08842 583 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 ICAM2P13598 275 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 IMPA1P29218 277 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 SLC1A2P43004 574 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 MAGEA3P43357 314 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 AVPR1BP47901 424 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 PCOLCEQ15113 449 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 INAQ16352 499 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 SYT16Q17RD7 645 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 THEMIS2Q5TEJ8 643 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 PLD3Q8IV08 490 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 SPNS2Q8IVW8 549 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 RASGEF1CQ8N431 466 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 CD200R1Q8TD46 325 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 CALML6Q8TD86 181 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 MAGOHBQ96A72 148 aaKnown RBP16.85■□□□□ 0.29
SSBP1-215ENST00000612337 MAGEB10Q96LZ2 347 aaPredicted RBP16.85■□□□□ 0.29
SSBP1-215ENST00000612337 PRAP1Q96NZ9 151 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 GPR21Q99679 349 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 MKL2Q9ULH7 1088 aa16.85■□□□□ 0.29
SSBP1-215ENST00000612337 KCNE1BA0A087WTH5 132 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 GOLGA8MH3BSY2 632 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 EIF3FO00303 357 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 JRKO75564 520 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 CELA2AP08217 269 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 HRH2P25021 359 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 TDGF1P3P51864 188 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 EFNA3P52797 238 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 MAT1AQ00266 395 aaKnown RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 ZRSR2Q15696 482 aaKnown RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 UBE2R2Q712K3 238 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 PIWIL4Q7Z3Z4 852 aaKnown RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 LRRC8AQ8IWT6 810 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 CPNE9Q8IYJ1 553 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 IMMP1LQ96LU5 166 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 TAAR6Q96RI8 345 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 RNF32Q9H0A6 362 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 C20orf96Q9NUD7 363 aaPredicted RBP16.84■□□□□ 0.29
SSBP1-215ENST00000612337 TMEM184CQ9NVA4 438 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 NEU2Q9Y3R4 380 aa16.84■□□□□ 0.29
SSBP1-215ENST00000612337 A0A1B0GUH1 482 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 H0YIG0 161 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 NSA2O95478 260 aaKnown RBP16.83■□□□□ 0.28
SSBP1-215ENST00000612337 WDPCPO95876 746 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 UQCRHP07919 91 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 CYC1P08574 325 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 C8orf89P0DMQ9 161 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 ITGAMP11215 1152 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.28
SSBP1-215ENST00000612337 RPS15AP62244 130 aaKnown RBP16.83■□□□□ 0.28
SSBP1-215ENST00000612337 VN1R4Q7Z5H5 301 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 SLC34A3Q8N130 599 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 AGGF1Q8N302 714 aaeCLIP16.83■□□□□ 0.28
SSBP1-215ENST00000612337 METTL21AQ8WXB1 218 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 NR4A3Q92570 626 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 AARSD1Q9BTE6 412 aaKnown RBP16.83■□□□□ 0.28
SSBP1-215ENST00000612337 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.83■□□□□ 0.281e-22■■■■■ 28.8
SSBP1-215ENST00000612337 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 FBXO5Q9UKT4 447 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 MAD1L1Q9Y6D9 718 aa16.83■□□□□ 0.28
SSBP1-215ENST00000612337 HAUS5O94927 633 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 F10P00742 488 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 TBPL1P62380 186 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 SNRPNP63162 240 aaKnown RBP16.82■□□□□ 0.28
SSBP1-215ENST00000612337 CCZ1BP86790 482 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 CCZ1P86791 482 aaPredicted RBP16.82■□□□□ 0.28
SSBP1-215ENST00000612337 MPP1Q00013 466 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 CYP1B1Q16678 543 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 HSP90AA5PQ58FG0 334 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 LRRC8EQ6NSJ5 796 aa16.82■□□□□ 0.28
SSBP1-215ENST00000612337 HIBCHQ6NVY1 386 aaPredicted RBP16.82■□□□□ 0.28
SSBP1-215ENST00000612337 CCDC137Q6PK04 289 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms