RNA–Protein interactions for RNA: ENST00000611841.1

EP400-208, Transcript of E1A binding protein p400, human

TSL 5

Gene EP400, Length 3,129 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EP400-208	ENST00000611841	CPSF4	O95639	269 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	COL6A1	P12109	1028 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	PRKACA	P17612	351 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ATF4	P18848	351 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	HOXD10	P28358	340 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	GABRR2	P28476	465 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	WEE1	P30291	646 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ETV3	P41162	512 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	HTR3A	P46098	478 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	CLK1	P49759	484 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	EPHB3	P54753	998 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ZXDB	P98169	803 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	IL5RA	Q01344	420 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	SIM2	Q14190	667 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	STK11	Q15831	433 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	NKG7	Q16617	165 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ZNF544	Q6NX49	715 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	UBE2R2	Q712K3	238 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	RBM23	Q86U06	439 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	GALNT6	Q8NCL4	622 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	GPR26	Q8NDV2	337 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ANGPTL6	Q8NI99	470 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	BPIFB1	Q8TDL5	484 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	RASSF5	Q8WWW0	418 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	SNAPC3	Q92966	411 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	COPS8	Q99627	209 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	INPP5K	Q9BT40	448 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ELAC1	Q9H777	363 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	C1orf109	Q9NX04	203 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ERVK-18	Q9QC07	812 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	HECA	Q9UBI9	543 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	TEKT2	Q9UIF3	430 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	DLGAP4	Q9Y2H0	992 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	WBP11	Q9Y2W2	641 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841		H7C0S8	307 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	POLR1C	O15160	346 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	NPPA	P01160	153 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	FTH1	P02794	183 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	C7	P10643	843 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	MSH3	P20585	1137 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	TACR1	P25103	407 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	UQCRC1	P31930	480 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	AP1S1	P61966	158 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	PUS10	Q3MIT2	529 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	POM121L1P	Q3SYA9	428 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ERAP2	Q6P179	960 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ZNF621	Q6ZSS3	439 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	LACC1	Q8IV20	430 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	NETO1	Q8TDF5	533 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	IGSF21	Q96ID5	467 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	FYTTD1	Q96QD9	318 aa	Known RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ZDHHC6	Q9H6R6	413 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.14	□□□□□ -0.63
EP400-208	ENST00000611841	SLC25A37	Q9NYZ2	338 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	VPS4A	Q9UN37	437 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	SLC22A14	Q9Y267	594 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	OARD1	Q9Y530	152 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	PCDHB14	Q9Y5E9	798 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	SCN4A	P35499	1836 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	NLRC5	Q86WI3	1866 aa		11.14	□□□□□ -0.63
EP400-208	ENST00000611841	ARNTL	O00327	626 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	ANKRD28	O15084	1053 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	FADS2	O95864	444 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	PDYN	P01213	254 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	DNTT	P04053	509 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	POLR2C	P19387	275 aa	Predicted RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	ACRV1	P26436	265 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	SERPINA4	P29622	427 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	SPAM1	P38567	509 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	CTSO	P43234	321 aa	Predicted RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	RPS14	P62263	151 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	MAD2L1	Q13257	205 aa	Predicted RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	KCNAB2	Q13303	367 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	ATP13A5	Q4VNC0	1218 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	TTC23	Q5W5X9	447 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	BBS7	Q8IWZ6	715 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	CMTM8	Q8IZV2	173 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	FAM109A	Q8N4B1	249 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	PAPD5	Q8NDF8	572 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	GRPEL2	Q8TAA5	225 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	MCOLN3	Q8TDD5	553 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	PHF10	Q8WUB8	498 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	LSM7	Q9UK45	103 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	ORC6	Q9Y5N6	252 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	TRPM7	Q96QT4	1865 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	AREL1	O15033	823 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	FZD6	O60353	706 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	CREG1	O75629	220 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	IGSF6	O95976	241 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	PTTG1	O95997	202 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	NTRK1	P04629	796 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	ALPL	P05186	524 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	IL6	P05231	212 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	FMO3	P31513	532 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	CD70	P32970	193 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	NKX3-2	P78367	333 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	PON2	Q15165	354 aa		11.13	□□□□□ -0.63
EP400-208	ENST00000611841	SF1	Q15637	639 aa	Known RBP	11.13	□□□□□ -0.63
EP400-208	ENST00000611841	SYT16	Q17RD7	645 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms