RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ZNF805Q5CZA5 627 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TRAF7Q6Q0C0 670 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MSANTD1Q6ZTZ1 278 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 NUDT8Q8WV74 236 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SLCO4A1Q96BD0 722 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 GORASP2Q9H8Y8 452 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TAS2R9Q9NYW1 312 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 PDE9AO76083 593 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SMIM18P0DKX4 95 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 CDK4P11802 303 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 IDSP22304 550 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 AOAHP28039 575 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 PCSK6P29122 969 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TIA1P31483 386 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNX13-213ENST00000611725 PIK3CBP42338 1070 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 PLA2G16P53816 162 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SMIM11AP58511 58 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 NTHL1P78549 312 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ELAVL3Q14576 367 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 CYBRD1Q53TN4 286 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SLC39A5Q6ZMH5 540 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 C11orf74Q86VG3 221 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 CLECL1Q8IZS7 167 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 OR10G2Q8NGC3 310 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 EXOSC8Q96B26 276 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 MYOCQ99972 504 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 RERGLQ9H628 205 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SEC14L3Q9UDX4 400 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ENTPD4Q9Y227 616 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 EP400Q96L91 3159 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 B4GAT1O43505 415 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MMP20O60882 483 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 CD160O95971 181 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ZNF12P17014 697 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ALDH4A1P30038 563 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 OLR1P78380 273 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ZNF33BQ06732 778 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 PDGFRLQ15198 375 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 HMBOX1Q6NT76 420 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MTSS1LQ765P7 747 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 GRASPQ7Z6J2 395 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 VTCN1Q7Z7D3 282 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 GALNT13Q8IUC8 556 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MCCC1Q96RQ3 725 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 CPEB1Q9BZB8 566 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 PRRG3Q9BZD7 231 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 DCAF13Q9NV06 445 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 ZNF451Q9Y4E5 1061 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 CEPT1Q9Y6K0 416 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SBF2Q86WG5 1849 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SAP18O00422 153 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 OR7A17O14581 309 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MITFO75030 526 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 DDX6P26196 483 aaKnown RBP eCLIP6.17□□□□□ -1.42
SNX13-213ENST00000611725 POLR2IP36954 125 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 TMBIM6P55061 237 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MEF2AQ02078 507 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 PPIGQ13427 754 aaKnown RBP eCLIP6.17□□□□□ -1.423e-7■■■□□ 18.3
SNX13-213ENST00000611725 PRAMEF14Q5SWL7 426 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 PRAMEF13Q5VWM6 474 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 ANKRD26P1Q6NSI1 321 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 KLHL35Q6PF15 583 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 SUSD1Q6UWL2 747 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 DLEU7Q6UYE1 221 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 DEF8Q6ZN54 512 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 NUDT13Q86X67 352 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 EPHX4Q8IUS5 362 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 MMAAQ8IVH4 418 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 METTL25Q8N6Q8 603 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 CELF5Q8N6W0 485 aaKnown RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 OR2A12Q8NGT7 310 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 POF1BQ8WVV4 589 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 OTULINQ96BN8 352 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TESCQ96BS2 214 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 STOX2Q9P2F5 926 aaPredicted RBP6.17□□□□□ -1.42
SNX13-213ENST00000611725 ERGIC3Q9Y282 383 aa6.17□□□□□ -1.42
SNX13-213ENST00000611725 TTC34A8MYJ7 566 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 ALPLP05186 524 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 TNNI3P19429 210 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 PCYT1AP49585 367 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 RPS13P62277 151 aaKnown RBP6.16□□□□□ -1.42
SNX13-213ENST00000611725 MOGQ16653 247 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 ATAD3BQ5T9A4 648 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 EGFLAMQ63HQ2 1017 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 TRIM46Q7Z4K8 759 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 L3MBTL4Q8NA19 623 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 OR5AK3PQ8NH89 298 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 BPIFB1Q8TDL5 484 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 ZNF607Q96SK3 696 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 P2RY13Q9BPV8 354 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 CLMPQ9H6B4 373 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 EBF1Q9UH73 591 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 PNMA8CA0A1B0GUJ8 204 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 TRBC2A0A5B9 178 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 TOR1BO14657 336 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 AIREO43918 545 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 DLGAP3O95886 979 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 ADH5P11766 374 aa6.16□□□□□ -1.42
SNX13-213ENST00000611725 HRH2P25021 359 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms