RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 CELF2O95319 508 aaKnown RBP14.22□□□□□ -0.13
VPS36-207ENST00000611132 BMP4P12644 408 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 CSTF1Q05048 431 aaKnown RBP14.22□□□□□ -0.13
VPS36-207ENST00000611132 KEAP1Q14145 624 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 DEFB132Q7Z7B7 95 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 NETO1Q8TDF5 533 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 TMEM80Q96HE8 168 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 GORASP2Q9H8Y8 452 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 UCKL1Q9NWZ5 548 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 SLAMF8Q9P0V8 285 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 GTF2A1LQ9UNN4 478 aa14.22□□□□□ -0.13
VPS36-207ENST00000611132 ADAMTSL3P82987 1691 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 FAM155AB1AL88 458 aaPredicted RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 ARNTLO00327 626 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 KHDRBS3O75525 346 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 IFNA7P01567 189 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 HOXD10P28358 340 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 ARCN1P48444 511 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 CENPAP49450 140 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 GTDC1Q4AE62 458 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 ARHGAP15Q53QZ3 475 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 IRAK1BP1Q5VVH5 260 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 DUS1LQ6P1R4 473 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 C1orf52Q8N6N3 182 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 UCK2Q9BZX2 261 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 BAIAP2Q9UQB8 552 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 FYNP06241 537 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 RPS17P08708 135 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 ALPIP09923 528 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 CD247P20963 164 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 PRDX3P30048 256 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 PNLIPRP1P54315 467 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 CXCR4P61073 352 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 YIPF2Q9BWQ6 316 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 C12orf4Q9NQ89 552 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 DNAJC27Q9NZQ0 273 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 SCML2Q9UQR0 700 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 MARF1Q9Y4F3 1742 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 A0A1W2PQ67 120 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 APLP1P51693 650 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 HSF2Q03933 536 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 PTCHD3Q3KNS1 767 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 IDNKQ5T6J7 187 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 ZNF691Q5VV52 312 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 ASB18Q6ZVZ8 466 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■■■□ 24.3
VPS36-207ENST00000611132 UBXN10Q96LJ8 280 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 UHRF1Q96T88 793 aaPredicted RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 SLC2A11Q9BYW1 496 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 RBM38Q9H0Z9 239 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 ZBTB20Q9HC78 741 aaPredicted RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 DCAF13Q9NV06 445 aaKnown RBP14.21□□□□□ -0.13
VPS36-207ENST00000611132 MBD2Q9UBB5 411 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 POU2F3Q9UKI9 436 aa14.21□□□□□ -0.13
VPS36-207ENST00000611132 PDE4DIPQ5VU43 2346 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 A0A1W2PRB8 838 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 ZSCAN5BA6NJL1 495 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 OR2AG2A6NM03 316 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 NT5C1B-RDH14C9J2C7 533 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 H3BM21 787 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 OR2B3O76000 313 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 NUP62P37198 522 aaPredicted RBP14.21□□□□□ -0.14
VPS36-207ENST00000611132 GMFBP60983 142 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 HNRNPA0Q13151 305 aaKnown RBP14.21□□□□□ -0.14
VPS36-207ENST00000611132 CRB2Q5IJ48 1285 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 AGAP6Q5VW22 663 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 TNFAIP8L2Q6P589 184 aaPredicted RBP14.21□□□□□ -0.14
VPS36-207ENST00000611132 CYP4V2Q6ZWL3 525 aaPredicted RBP14.21□□□□□ -0.14
VPS36-207ENST00000611132 NPAS3Q8IXF0 933 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 SLCO4A1Q96BD0 722 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 AGAP4Q96P64 663 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 ABCD2Q9UBJ2 740 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 RIMKLBQ9ULI2 386 aa14.21□□□□□ -0.14
VPS36-207ENST00000611132 TPST2O60704 377 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 OR5F1O95221 314 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 ERP29P30040 261 aaKnown RBP14.2□□□□□ -0.14
VPS36-207ENST00000611132 HOXA11P31270 313 aaPredicted RBP14.2□□□□□ -0.14
VPS36-207ENST00000611132 MTAPQ13126 283 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 KDELC1Q6UW63 502 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 VTCN1Q7Z7D3 282 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 SLC30A8Q8IWU4 369 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 MCMBPQ9BTE3 642 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 EIF3KQ9UBQ5 218 aaKnown RBP14.2□□□□□ -0.14
VPS36-207ENST00000611132 CLCA1A8K7I4 914 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 RPS3P23396 243 aaKnown RBP eCLIP14.2□□□□□ -0.14
VPS36-207ENST00000611132 PSMD4P55036 377 aaKnown RBP14.2□□□□□ -0.14
VPS36-207ENST00000611132 FCGRTP55899 365 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 AP1S2P56377 157 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 CLDN8P56748 225 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 ZBTB6Q15916 424 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 DSG4Q86SJ6 1040 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 MARCH9Q86YJ5 346 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 LILRB4Q8NHJ6 448 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 NFKBIDQ8NI38 313 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 SOCS4Q8WXH5 440 aa14.2□□□□□ -0.14
VPS36-207ENST00000611132 DUS3LQ96G46 650 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms