RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ATG9BQ674R7 924 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 FRMPD2BQ6IN97 320 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 RHBDD2Q6NTF9 364 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 LRIG3Q6UXM1 1119 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 SH2D5Q6ZV89 423 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 CSNK1A1LQ8N752 337 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
CTSA-219ENST00000607841 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 PROKR1Q8TCW9 393 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 NKD1Q969G9 470 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 DPH2Q9BQC3 489 aaPredicted RBP13.64□□□□□ -0.23
CTSA-219ENST00000607841 EFHD1Q9BUP0 239 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 SARGQ9BW04 601 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 IQCGQ9H095 443 aaKnown RBP13.64□□□□□ -0.23
CTSA-219ENST00000607841 EHD1Q9H4M9 534 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 ZMIZ1Q9ULJ6 1067 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 SH2B3Q9UQQ2 575 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 A0A087WV48 116 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 LOC105369274A0A096LPK9 316 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 LOC102723532A0A0G2JNH3 316 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 FITM1A5D6W6 292 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 MEN1O00255 615 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 RGS16O15492 202 aaPredicted RBP13.63□□□□□ -0.23
CTSA-219ENST00000607841 AGXTP21549 392 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 AGTR2P50052 363 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 EMP3P54852 163 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 LAPTM5Q13571 262 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
CTSA-219ENST00000607841 CCDC153Q494R4 210 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 PAGE2BQ5JRK9 111 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 MANEAQ5SRI9 462 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 CEP85LQ5SZL2 805 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 PRAMEF17Q5VTA0 474 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 SLCO4C1Q6ZQN7 724 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 TIPARPQ7Z3E1 657 aaKnown RBP13.63□□□□□ -0.23
CTSA-219ENST00000607841 TRABD2AQ86V40 505 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 PLD3Q8IV08 490 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 OR4N4Q8N0Y3 316 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 MFSD9Q8NBP5 474 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 CAMKVQ8NCB2 501 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 KIAA1143Q96AT1 154 aaPredicted RBP13.63□□□□□ -0.23
CTSA-219ENST00000607841 PHF21BQ96EK2 531 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 ZIM3Q96PE6 472 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 SMC6Q96SB8 1091 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 C17orf62Q9BQA9 187 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 PITHD1Q9GZP4 211 aaPredicted RBP13.63□□□□□ -0.23
CTSA-219ENST00000607841 LHX9Q9NQ69 397 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 SENP1Q9P0U3 644 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 CHD8Q9HCK8 2581 aa13.63□□□□□ -0.23
CTSA-219ENST00000607841 FRYQ5TBA9 3013 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 FEZF1A0PJY2 475 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 HYKKA2RU49 373 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 FOXO6A8MYZ6 492 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 OR1F1O43749 312 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 CTSBP07858 339 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 ALAS2P22557 587 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 ATP5F1P24539 256 aaPredicted RBP13.62□□□□□ -0.23
CTSA-219ENST00000607841 GSTM2P28161 218 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 RORAP35398 523 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 AHRP35869 848 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 UCNP55089 124 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 REEP5Q00765 189 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 MEF2AQ02078 507 aaPredicted RBP13.62□□□□□ -0.23
CTSA-219ENST00000607841 IRF8Q02556 426 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 RBBP5Q15291 538 aaKnown RBP13.62□□□□□ -0.23
CTSA-219ENST00000607841 TGIF1Q15583 401 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 TBCCQ15814 346 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 ST3GAL2Q16842 350 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 MUM1Q2TAK8 710 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 PRTGQ2VWP7 1150 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 XKR6Q5GH73 641 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 GARNL3Q5VVW2 1013 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 C16orf46Q6P387 395 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 ASPGQ86U10 573 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 SLC22A9Q8IVM8 553 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 SPACA3Q8IXA5 215 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 SRRM1Q8IYB3 904 aaKnown RBP13.62□□□□□ -0.23
CTSA-219ENST00000607841 DSELQ8IZU8 1212 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 TMEM151AQ8N4L1 468 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 TEX9Q8N6V9 391 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 SLC38A9Q8NBW4 561 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 TTLQ8NG68 377 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 SLC13A3Q8WWT9 602 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 MR1Q95460 341 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 CCDC126Q96EE4 140 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
CTSA-219ENST00000607841 RUFY1Q96T51 708 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 EFCAB11Q9BUY7 163 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 NT5DC2Q9H857 520 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 STARD5Q9NSY2 213 aa13.62□□□□□ -0.23
CTSA-219ENST00000607841 CUTCQ9NTM9 273 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms