RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CDH6P55285 790 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PER3P56645 1201 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR85P60893 370 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SSTP61278 116 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ERVK-21P61565 698 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 DYNLT1P63172 113 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LIPEQ05469 1076 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CHRNB3Q05901 458 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RGS1Q08116 209 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPP2Q13103 211 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAB21L1Q13394 359 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GBX1Q14549 363 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF273Q14593 569 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 EIF4HQ15056 248 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TBCEQ15813 527 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 AANATQ16613 207 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 IMPG1Q17R60 797 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 HKDC1Q2TB90 917 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GTDC1Q4AE62 458 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 C2CD6Q53TS8 623 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ARMCX4Q5H9R4 360 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TSTD2Q5T7W7 516 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LRRC66Q68CR7 880 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPR139Q6DWJ6 353 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PM20D1Q6GTS8 502 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GLYATQ6IB77 296 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RETSATQ6NUM9 610 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CNSTQ6PJW8 725 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 METAP1DQ6UB28 335 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TEX261Q6UWH6 196 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 KIAA1324Q6UXG2 1013 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GPRIN3Q6ZVF9 776 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PLEKHM3Q6ZWE6 761 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 USP50Q70EL3 339 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SNX20Q7Z614 316 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 NECAB2Q7Z6G3 386 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GALNT10Q86SR1 603 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LUZP2Q86TE4 346 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RBM23Q86U06 439 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZBTB46Q86UZ6 589 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 XYLT1Q86Y38 959 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PHYKPLQ8IUZ5 450 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSTKQ8IV42 348 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CNTN4Q8IWV2 1026 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADHFE1Q8IWW8 467 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TRIM48Q8IWZ4 208 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC22A15Q8IZD6 547 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 EID3Q8N140 333 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MIER2Q8N344 545 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 FSTL5Q8N475 847 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CHCHD4Q8N4Q1 142 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 YIPF7Q8N8F6 280 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATAD1Q8NBU5 361 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GMCL1P1Q8NEA9 526 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF680Q8NEM1 530 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR4M2Q8NGB6 313 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 VANGL1Q8TAA9 524 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PCDH19Q8TAB3 1148 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 JOSD2Q8TAC2 188 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 WDR48Q8TAF3 677 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 C9orf43Q8TAL5 461 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CYP2W1Q8TAV3 490 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM110BQ8TC76 370 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PHOSPHO1Q8TCT1 267 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 UTP15Q8TED0 518 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ASB15Q8WXK1 588 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANAPC16Q96DE5 110 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MBD6Q96DN6 1003 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 L3HYPDHQ96EM0 354 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SGTBQ96EQ0 304 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MCCC1Q96RQ3 725 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LMF1Q96S06 567 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GAD1Q99259 594 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PITX2Q99697 317 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TTYH2Q9BSA4 534 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PI4K2AQ9BTU6 479 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 DGCR6LQ9BY27 220 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 C6orf62Q9GZU0 229 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RACGAP1Q9H0H5 632 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RANBP3Q9H6Z4 567 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF121Q9H920 327 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CASS4Q9NQ75 786 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZC4H2Q9NQZ6 224 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 DYRK4Q9NR20 520 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM49BQ9NUQ9 324 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC167Q9P0B6 97 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 COL20A1Q9P218 1284 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TEKT2Q9UIF3 430 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMEFF2Q9UIK5 374 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 KIF25Q9UIL4 384 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LEF1Q9UJU2 399 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ING1Q9UK53 422 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CDH9Q9ULB4 789 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACSL5Q9ULC5 683 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 NDRG4Q9ULP0 352 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RNF6Q9Y252 685 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms