RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 PPM1MQ96MI6 270 aa18.46■□□□□ 0.55
TUBB4B-202ENST00000604929 OR52E6Q96RD3 313 aa18.46■□□□□ 0.55
TUBB4B-202ENST00000604929 DYTNA2CJ06 578 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 ACOT8O14734 319 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DNAJA2O60884 412 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 NDUFS2O75306 463 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 TNFP01375 233 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 IL6P05231 212 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DCNP07585 359 aaKnown RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 CYP4F2P78329 520 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PHC1P78364 1004 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 RAE1P78406 368 aaKnown RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 MAPKAPK3Q16644 382 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 NANOGP8Q6NSW7 305 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DLEU7Q6UYE1 221 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DHDDSQ86SQ9 333 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 IFNEQ86WN2 208 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PLD3Q8IV08 490 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 KRT78Q8N1N4 520 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 OR2A1Q8NGT9 310 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 CHTF18Q8WVB6 975 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 SLC6A18Q96N87 628 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 TACO1Q9BSH4 297 aaKnown RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PCBD2Q9H0N5 130 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PIF1Q9H611 641 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 NANOGQ9H9S0 305 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 S100A14Q9HCY8 104 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DMRT3Q9NQL9 472 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PPT2Q9UMR5 302 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 DMTF1Q9Y222 760 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 RUVBL1Q9Y265 456 aaKnown RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 FOXE1O00358 373 aaPredicted RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 MYO1DO94832 1006 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 B3GALT4O96024 378 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 ANXA4P09525 319 aaPredicted RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PKLRP30613 574 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 SLC19A1P41440 591 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 CCR8P51685 355 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 MTAPQ13126 283 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 ICE2Q659A1 982 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 OR2L8Q8NGY9 312 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 C11orf24Q96F05 449 aaPredicted RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 ORAI3Q9BRQ5 295 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 TRNAU1APQ9NX07 287 aaKnown RBP18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 SPHK1Q9NYA1 384 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 PCDHA9Q9Y5H5 950 aa18.45■□□□□ 0.54
TUBB4B-202ENST00000604929 SPTY2D1-AS1A0A0U1RR47 76 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 CELA2BP08218 269 aaPredicted RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 AP2B1P63010 937 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PRDX1Q06830 199 aaKnown RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ILF3Q12906 894 aaKnown RBP eCLIP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 EIF2B5Q13144 721 aaKnown RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PRPF38BQ5VTL8 546 aaKnown RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PRMT9Q6P2P2 845 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 VN1R5Q7Z5H4 357 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ANKRD46Q86W74 232 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 SFTPA2Q8IWL1 248 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 DPP10Q8N608 796 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ANKRD53Q8N9V6 530 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 LCN9Q8WX39 176 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PATE1Q8WXA2 126 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 GTF2H4Q92759 462 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 TMEM125Q96AQ2 219 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 CXorf40BQ96DE9 158 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ASB9Q96DX5 294 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 KLHDC7BQ96G42 594 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 AIF1LQ9BQI0 150 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 STX18Q9P2W9 335 aaKnown RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 HEBP2Q9Y5Z4 205 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ARHGEF17Q96PE2 2063 aaPredicted RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 GNG14A0A1W2PPG7 69 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 BCAS2O75934 225 aaPredicted RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ANP32DO95626 131 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 S100A3P33764 101 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PTDSS1P48651 473 aaKnown RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 SLC34A1Q06495 639 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 C1orf61Q13536 156 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 FZD2Q14332 565 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ANKRD26P1Q6NSI1 321 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 CYP2R1Q6VVX0 501 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 DNAJC14Q6Y2X3 702 aaPredicted RBP18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ARMCX6Q7L4S7 300 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 RIMKLAQ8IXN7 391 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.44■□□□□ 0.544e-6■□□□□ 8.2
TUBB4B-202ENST00000604929 ABHD11Q8NFV4 315 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 OR7A2PQ8NGA2 310 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 UBE2E3Q969T4 207 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 ABCD2Q9UBJ2 740 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 EGFL7Q9UHF1 273 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 PCDHB11Q9Y5F2 797 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 DGKBQ9Y6T7 804 aa18.44■□□□□ 0.54
TUBB4B-202ENST00000604929 LAMA1P25391 3075 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 TDRD6O60522 2096 aaKnown RBP18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 CROCCQ5TZA2 2017 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 SDK1Q7Z5N4 2213 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 IGKV1-8A0A0C4DH67 115 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 ANKDD1BA6NHY2 528 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 OR1F1O43749 312 aa18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 LCMT2O60294 686 aaKnown RBP18.43■□□□□ 0.54
TUBB4B-202ENST00000604929 FKBP6O75344 327 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms