RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 GRM6O15303 877 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF705DP0CH99 300 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF705BP0CI00 300 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ALAS2P22557 587 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PRKACGP22612 351 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 JAM2P57087 298 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 PTERQ96BW5 349 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 NXPE2Q96DL1 559 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 COQ10AQ96MF6 247 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF347Q96SE7 839 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM27Q9HBJ8 222 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 ARHGEF4Q9NR80 690 aa8.49□□□□□ -1.05
CSMD1-216ENST00000602557 GRM3Q14832 879 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC73Q5JTD7 316 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PACRGLQ8N7B6 248 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR52B2Q96RD2 323 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF223Q9UK11 482 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PDCD5O14737 125 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GLUD1P00367 558 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 COL6A2P12110 1019 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 MFSD3Q96ES6 412 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 MMP28Q9H239 520 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 USP29Q9HBJ7 922 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 LOC100130705A0A1B0GUX0 176 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CHMP24386 653 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GABRR2P28476 465 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CD79BP40259 229 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 AIMP2Q13155 320 aaKnown RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PSRC1Q6PGN9 363 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR5T3Q8NGG3 340 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PHPT1Q9NRX4 125 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 RCOR3Q9P2K3 495 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 POM121CA8CG34 1229 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 B8ZZF3 427 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PROM1O43490 865 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CILPO75339 1184 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PRKCGP05129 697 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ASGR1P07306 291 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 RABGGTBP53611 331 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CLCQ05315 142 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GAL3ST4Q96RP7 486 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 TPT1P8Q9HAU6 139 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF334Q9HCZ1 680 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PARPBPQ9NWS1 579 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 DAPL1A0PJW8 107 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 TXNDC12O95881 172 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 HEPACAMQ14CZ8 416 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 FBXO43Q4G163 708 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 SAMD12Q8N8I0 201 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 SLC15A5A6NIM6 579 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR1F1O43749 312 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 MMP3P08254 477 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 HGSNATQ68CP4 663 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ZCCHC10Q8TBK6 192 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GTF2H4Q92759 462 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PTPN18Q99952 460 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 RBCK1Q9BYM8 510 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PDZD7Q9H5P4 517 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 F8W036 122 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 TLR4O00206 839 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 B4GALT4O60513 344 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 RNASEH2AO75792 299 aaKnown RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GOT2P00505 430 aaKnown RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 IFNA10P01566 189 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 IFNA4P05014 189 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CDK4P11802 303 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 MASP1P48740 699 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 BLOC1S1P78537 153 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 FAM122CQ6P4D5 195 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GALNT13Q8IUC8 556 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PDZD9Q8IXQ8 264 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GPR135Q8IZ08 494 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR7G2Q8NG99 324 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR10G2Q8NGC3 310 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR6K6Q8NGW6 343 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 OR10T2Q8NGX3 314 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ABCG4Q9H172 646 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 DLGAP1O14490 977 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 SLC1A2P43004 574 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PTPN9P43378 593 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 GALNT1Q10472 559 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-216ENST00000602557 CPNE8Q86YQ8 564 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 TIFAQ96CG3 184 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 NMUR1Q9HB89 426 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 POT1Q9NUX5 634 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ARL3P36405 182 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 ZDHHC20Q5W0Z9 365 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 SLC5A11Q8WWX8 675 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 FAM83DQ9H4H8 585 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHB1Q9Y5F3 818 aa8.48□□□□□ -1.05
CSMD1-216ENST00000602557 F5H0A9 414 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-216ENST00000602557 MT-CYBP00156 380 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-216ENST00000602557 VAMP2P63027 116 aa8.47□□□□□ -1.05
CSMD1-216ENST00000602557 SLC16A9Q7RTY1 509 aa8.47□□□□□ -1.05
CSMD1-216ENST00000602557 KLHL36Q8N4N3 616 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms