RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	MLLT3	P42568	568 aa	Predicted RBP	21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	PKNOX1	P55347	436 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	GALNT1	Q10472	559 aa	Predicted RBP	21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	KCNAB1	Q14722	419 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	NEIL2	Q969S2	332 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	NXPE2	Q96DL1	559 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	MAGEB10	Q96LZ2	347 aa	Predicted RBP	21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	ZNF382	Q96SR6	550 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	ZBTB26	Q9HCK0	441 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	PDE7B	Q9NP56	450 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	THAP1	Q9NVV9	213 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	SH2B3	Q9UQQ2	575 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	PCDHGA8	Q9Y5G5	932 aa		21.07	■□□□□ 0.96
LTBP4-227	ENST00000600026	TRABD2B	A6NFA1	517 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	MAPK10	P53779	464 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	GYS2	P54840	703 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	IRF8	Q02556	426 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	TMTC4	Q5T4D3	741 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	FCRL6	Q6DN72	434 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	FIGLA	Q6QHK4	219 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	MILR1	Q7Z6M3	343 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	NTMT1	Q9BV86	223 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	ACTR8	Q9H981	624 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	PELI2	Q9HAT8	420 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	FAM60A	Q9NP50	221 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	MID1IP1	Q9NPA3	183 aa		21.06	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR7A17	O14581	309 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	C1GALT1C1L	P0DN25	315 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	CDH1	P12830	882 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	FOLR1	P15328	257 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	EPOR	P19235	508 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	CCR10	P46092	362 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	PCDH1	Q08174	1060 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	CHIT1	Q13231	466 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	RTP5	Q14D33	572 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	XKR6	Q5GH73	641 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	ARL13A	Q5H913	290 aa	Predicted RBP	21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	TTC19	Q6DKK2	380 aa	Predicted RBP	21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	NXPE4	Q6UWF7	544 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	RGS9BP	Q6ZS82	235 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	GPRIN3	Q6ZVF9	776 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	TMPRSS11B	Q86T26	416 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	KIRREL3	Q8IZU9	778 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	TCTN2	Q96GX1	697 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	DPH7	Q9BTV6	452 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	EHD1	Q9H4M9	534 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	CCDC134	Q9H6E4	229 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	TMEM184C	Q9NVA4	438 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	CUEDC1	Q9NWM3	386 aa	Predicted RBP	21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	SNX7	Q9UNH6	387 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	KLK4	Q9Y5K2	254 aa		21.05	■□□□□ 0.96
LTBP4-227	ENST00000600026	IGKV1-8	A0A0C4DH67	115 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026		E7EQ34	232 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	MAP3K7	O43318	606 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ITM2A	O43736	263 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	NRP2	O60462	931 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	UGDH	O60701	494 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	SNN	O75324	88 aa	Predicted RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CRCP	O75575	148 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	LYPLA1	O75608	230 aa	Predicted RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	TNFSF15	O95150	251 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CLDN9	O95484	217 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CXCR2	P25025	360 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CASP2	P42575	452 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CCR8	P51685	355 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	MC2R	Q01718	297 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ACY1	Q03154	408 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	FOXM1	Q08050	763 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	TRAF3	Q13114	568 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	TUBB3	Q13509	450 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	LAPTM5	Q13571	262 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	GPR19	Q15760	415 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	DEFB110	Q30KQ9	67 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	TUBB8	Q3ZCM7	444 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	LIPJ	Q5W064	366 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CES4A	Q5XG92	561 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ATG9B	Q674R7	924 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	SLCO4C1	Q6ZQN7	724 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ADCK2	Q7Z695	626 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CUZD1	Q86UP6	607 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	MYLK4	Q86YV6	388 aa	Predicted RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	HOMEZ	Q8IX15	550 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	LSMEM2	Q8N112	164 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR52B6	Q8NGF0	335 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	AGAP11	Q8TF27	550 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	PMEPA1	Q969W9	287 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ZUFSP	Q96AP4	578 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	PTCD3	Q96EY7	689 aa	Known RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR6C1	Q96RD1	312 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	EFCAB11	Q9BUY7	163 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	CHRNA10	Q9GZZ6	450 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ILKAP	Q9H0C8	392 aa	Predicted RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	APMAP	Q9HDC9	416 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	SLC39A1	Q9NY26	324 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	ANKMY1	Q9P2S6	941 aa		21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	21.04	■□□□□ 0.96
LTBP4-227	ENST00000600026	OR2A25	A4D2G3	310 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	ESRRB	O95718	433 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	CHRNG	P07510	517 aa		21.03	■□□□□ 0.96
LTBP4-227	ENST00000600026	HNF4A	P41235	474 aa		21.03	■□□□□ 0.96

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms