RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 NMRK1Q9NWW6 199 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 NCDNQ9UBB6 729 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 POMT2Q9UKY4 750 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 TSC22D4Q9Y3Q8 395 aa14.85□□□□□ -0.03
UPF1-206ENST00000598471 LNP1A1A4G5 178 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 ANKDD1BA6NHY2 528 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 LRP3O75074 770 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 LBPP18428 481 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 TGM1P22735 817 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 ALDH4A1P30038 563 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 PIK3CBP42338 1070 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 IRX1P78414 480 aaPredicted RBP14.84□□□□□ -0.03
UPF1-206ENST00000598471 DAB2P98082 770 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 MEF2AQ02078 507 aaPredicted RBP14.84□□□□□ -0.03
UPF1-206ENST00000598471 DDX39BQ13838 428 aaKnown RBP14.84□□□□□ -0.03
UPF1-206ENST00000598471 LSM12Q3MHD2 195 aaKnown RBP14.84□□□□□ -0.03
UPF1-206ENST00000598471 ATP6AP1LQ52LC2 224 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 KIAA1614Q5VZ46 1190 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 ZNF425Q6IV72 752 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 IRGCQ6NXR0 463 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 TRIM73Q86UV7 250 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 FLVCR1-AS1Q8TAF5 88 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 ZUFSPQ96AP4 578 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 MTFMTQ96DP5 389 aaKnown RBP14.84□□□□□ -0.03
UPF1-206ENST00000598471 ZDHHC12Q96GR4 267 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 C3orf30Q96M34 536 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 LRRC37BQ96QE4 947 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 CD180Q99467 661 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 RAB33BQ9H082 229 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 AKTIPQ9H8T0 292 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 PTGDR2Q9Y5Y4 395 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 USP34Q70CQ2 3546 aa14.84□□□□□ -0.03
UPF1-206ENST00000598471 IGHV1OR21-1A0A087WYE8 117 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 IGKV1-8A0A0C4DH67 115 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 E9PBE3 544 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 FOXE1O00358 373 aaPredicted RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 EBAG9O00559 213 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 FLRT2O43155 660 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 TNFSF14O43557 240 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 OR1F1O43749 312 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 KLHL41O60662 606 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 ATP6AP2O75787 350 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 RSL1D1O76021 490 aaKnown RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 SERPINA6P08185 405 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 EZRP15311 586 aaKnown RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 NCF2P19878 526 aaPredicted RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 MAGP20916 626 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 CDH3P22223 829 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 GRIA3P42263 894 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 RPS15AP62244 130 aaKnown RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 YBX1P67809 324 aaKnown RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 MAD2L1Q13257 205 aaPredicted RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 SMU1Q2TAY7 513 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 FIGLAQ6QHK4 219 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 LARP4Q71RC2 724 aaKnown RBP eCLIP14.83□□□□□ -0.04
UPF1-206ENST00000598471 SPATA19Q7Z5L4 167 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 PAQR7Q86WK9 346 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 FAM20CQ8IXL6 584 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 HUS1BQ8NHY5 278 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 CCDC74AQ96AQ1 378 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 HBEGFQ99075 208 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 SPNS1Q9H2V7 528 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 RHBGQ9H310 441 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 SEMA6CQ9H3T2 930 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 FARSBQ9NSD9 589 aaKnown RBP14.83□□□□□ -0.04
UPF1-206ENST00000598471 EPHA6Q9UF33 1036 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 PPT2Q9UMR5 302 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 KLK4Q9Y5K2 254 aa14.83□□□□□ -0.04
UPF1-206ENST00000598471 DMDP11532 3685 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 ADAMTS9Q9P2N4 1935 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 GPR179Q6PRD1 2367 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 CPED1A4D0V7 1026 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 OR2A25A4D2G3 310 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 HAT1O14929 419 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 UBDO15205 165 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 AHRP35869 848 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 SCTRP47872 440 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 NEK2P51955 445 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 OR1D5P58170 312 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 STX1BP61266 288 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 SPEM2Q0P670 501 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 SLC14A1Q13336 389 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 TUBB3Q13509 450 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 GALNTL6Q49A17 601 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 SPDYAQ5MJ70 313 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 FAM219BQ5XKK7 198 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 OGFOD2Q6N063 350 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 MTDHQ86UE4 582 aaKnown RBP14.82□□□□□ -0.04
UPF1-206ENST00000598471 PLXDC1Q8IUK5 500 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 PARP9Q8IXQ6 854 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.82□□□□□ -0.04
UPF1-206ENST00000598471 CARFQ8N187 725 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 Q8N9G6 341 aaPredicted RBP14.82□□□□□ -0.04
UPF1-206ENST00000598471 ZNF740Q8NDX6 193 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 NCSTNQ92542 709 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 THAP11Q96EK4 314 aa14.82□□□□□ -0.04
UPF1-206ENST00000598471 PRR11Q96HE9 360 aaPredicted RBP14.82□□□□□ -0.04
UPF1-206ENST00000598471 MTERF1Q99551 399 aaKnown RBP14.82□□□□□ -0.04
UPF1-206ENST00000598471 SERPINI1Q99574 410 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms