RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C3orf62Q6ZUJ4 267 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 FAM45AQ8TCE6 357 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 CD200R1Q8TD46 325 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 LMF1Q96S06 567 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 MTRF1LQ9UGC7 380 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 CIDEBQ9UHD4 219 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 MED16Q9Y2X0 877 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 VWA7Q9Y334 891 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 NFS1Q9Y697 457 aa16.73■□□□□ 0.27
SHKBP1-203ENST00000594298 MYO9AB2RTY4 2548 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 HYKKA2RU49 373 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 ZNF839A8K0R7 811 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 ZBTB14O43829 449 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 PSIP1O75475 530 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 HPP00738 406 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 MAGEA4P43358 317 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 PER3P56645 1201 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 Q0VFX4 171 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 CDC16Q13042 620 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 MFAP5Q13361 173 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 PDAP1Q13442 181 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 TRADDQ15628 312 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 WASHC2DQ5SRD0 308 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 C1QL3Q5VWW1 255 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 RPUSD3Q6P087 351 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 ISLR2Q6UXK2 745 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 SHISA6Q6ZSJ9 500 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 GPATCH11Q8N954 259 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 OR9A1PQ8NGU1 263 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 THOC3Q96J01 351 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 NDNQ99608 321 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 CRB3Q9BUF7 120 aa16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 TSR3Q9UJK0 312 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-203ENST00000594298 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 ESYT3A0FGR9 886 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 LRRTM2O43300 516 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 SSTR1P30872 391 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 BDKRB1P46663 353 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 VSX2P58304 361 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 CUL1Q13616 776 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 RNF44Q7L0R7 432 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 CPNE9Q8IYJ1 553 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 MYO1HQ8N1T3 1032 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 METTL27Q8N6F8 245 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 NOA1Q8NC60 698 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 FBXO15Q8NCQ5 510 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 OR2L3Q8NG85 312 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 OR2A1Q8NGT9 310 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 GIMAP7Q8NHV1 300 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 STT3BQ8TCJ2 826 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 ASB11Q8WXH4 323 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 CNDP1Q96KN2 507 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 SLC30A3Q99726 388 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 SLX1AQ9BQ83 275 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 ZNF304Q9HCX3 659 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 OSGIN2Q9Y236 505 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 MAU2Q9Y6X3 613 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 NUP210LQ5VU65 1888 aa16.71■□□□□ 0.27
SHKBP1-203ENST00000594298 IGLV3-12A0A075B6K2 115 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 MED26O95402 600 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 STSP08842 583 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 ZGLP1P0C6A0 271 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 EMP3P54852 163 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 IL2P60568 153 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 OCA2Q04671 838 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 KLC1Q07866 573 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 ARHGAP19Q14CB8 494 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 NAA25Q14CX7 972 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 ZRSR2Q15696 482 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 ATG9BQ674R7 924 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 FRMPD2BQ6IN97 320 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 CYHR1Q6ZMK1 362 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 DTWD1Q8N5C7 304 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 MCOLN3Q8TDD5 553 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 MIEF2Q96C03 454 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 VPS39Q96JC1 886 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 MIPEPQ99797 713 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 ZDHHC18Q9NUE0 388 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 SLC17A6Q9P2U8 582 aa16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-203ENST00000594298 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 A0A1W2PPV9 198 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 A0A1W2PQ72 361 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 ARHGEF33A8MVX0 844 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 GFYI3L273 518 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 MYO1CO00159 1063 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 MAP2K7O14733 419 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 SLC16A5O15375 505 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 KLHL18O94889 574 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 C8GP07360 202 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 ACPPP15309 386 aa16.69■□□□□ 0.26
SHKBP1-203ENST00000594298 PSMB5P28074 263 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms