RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TYK2P29597 1187 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 MAGEA12P43365 314 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 CCR8P51685 355 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 EMP3P54852 163 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 MUM1Q2TAK8 710 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 HKDC1Q2TB90 917 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 C18orf21Q32NC0 220 aaPredicted RBP13.9□□□□□ -0.19
VRK3-206ENST00000594090 CDKL4Q5MAI5 379 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 PCSK4Q6UW60 755 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 ISCA2Q86U28 154 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 DTWD1Q8N5C7 304 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 OR4K1Q8NGD4 311 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 SLC5A11Q8WWX8 675 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 EXTL1Q92935 676 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 EXT2Q93063 718 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 NXNL1Q96CM4 212 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 THAP11Q96EK4 314 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 CABS1Q96KC9 395 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 TMEM79Q9BSE2 394 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 EPB41L4BQ9H329 900 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 ANKZF1Q9H8Y5 726 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 WWOXQ9NZC7 414 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 CD274Q9NZQ7 290 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 IFT80Q9P2H3 777 aaPredicted RBP13.9□□□□□ -0.19
VRK3-206ENST00000594090 GPN3Q9UHW5 284 aaPredicted RBP13.9□□□□□ -0.19
VRK3-206ENST00000594090 TCFL5Q9UL49 500 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 SLC22A14Q9Y267 594 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 KCNE1BA0A087WTH5 132 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 FEZF1A0PJY2 475 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 CDC14CA4D256 554 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 TXNDC9O14530 226 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 TAPBPO15533 448 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 KRT38O76015 456 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 IPO13O94829 963 aaKnown RBP13.89□□□□□ -0.19
VRK3-206ENST00000594090 ONECUT2O95948 504 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 GRK3P35626 688 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 BCL6P41182 706 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 GDF5P43026 501 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 KCNC1P48547 511 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 IL10RAQ13651 578 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 SLC9A5Q14940 896 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 TBR1Q16650 682 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 FAM83EQ2M2I3 478 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 CATSPEREQ5SY80 951 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 FAM69BQ5VUD6 431 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 MLIPQ5VWP3 458 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 SULT1C3Q6IMI6 304 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 COX15Q7KZN9 410 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 VN1R4Q7Z5H5 301 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 ARHGEF39Q8N4T4 335 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 METTL27Q8N6F8 245 aaPredicted RBP13.89□□□□□ -0.19
VRK3-206ENST00000594090 STAG3L4Q8TBR4 150 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
VRK3-206ENST00000594090 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 VPS11Q9H270 941 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 SLC22A11Q9NSA0 550 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 NUDT4Q9NZJ9 180 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 PADI2Q9Y2J8 665 aa13.89□□□□□ -0.19
VRK3-206ENST00000594090 TRIM49D1C9J1S8 452 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 ATXN7O15265 892 aaPredicted RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 LCMT2O60294 686 aaKnown RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 KLHL2O95198 593 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 SLU7O95391 586 aaKnown RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 STATHP02808 62 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 S100BP04271 92 aaPredicted RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 GCAP28676 217 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 GGT5P36269 586 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 GLRBP48167 497 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 MEF2AQ02078 507 aaPredicted RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 SLC29A2Q14542 456 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 UGT8Q16880 541 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 LINC00303Q3SY05 128 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 GARNL3Q5VVW2 1013 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 MRPL14Q6P1L8 145 aaKnown RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 PRMT9Q6P2P2 845 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 BORAQ6PGQ7 559 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.88□□□□□ -0.19
VRK3-206ENST00000594090 FKBP10Q96AY3 582 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 SARGQ9BW04 601 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 SPNS1Q9H2V7 528 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 CNOT10Q9H9A5 744 aaKnown RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 PELI2Q9HAT8 420 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 PTBP2Q9UKA9 531 aaKnown RBP13.88□□□□□ -0.19
VRK3-206ENST00000594090 KCNE2Q9Y6J6 123 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 ATMQ13315 3056 aa13.88□□□□□ -0.19
VRK3-206ENST00000594090 TRBC2A0A5B9 178 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 SUPT3HB4E1H0 165 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 UBXN8O00124 270 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 CNOT3O75175 753 aaKnown RBP13.87□□□□□ -0.19
VRK3-206ENST00000594090 SUPT3HO75486 399 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 KLF7O75840 302 aaPredicted RBP13.87□□□□□ -0.19
VRK3-206ENST00000594090 PIM1P11309 404 aaPredicted RBP13.87□□□□□ -0.19
VRK3-206ENST00000594090 OR1D4P47884 311 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 HSPA7P48741 367 aa13.87□□□□□ -0.19
VRK3-206ENST00000594090 REEP5Q00765 189 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms