RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LRRC56Q8IYG6 542 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-207ENST00000593089 AMER2Q8N7J2 671 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 MAGOHBQ96A72 148 aaKnown RBP19.42■□□□□ 0.7
TRIM47-207ENST00000593089 PRAP1Q96NZ9 151 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 SERPINB12Q96P63 405 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 XAB2Q9HCS7 855 aaKnown RBP19.42■□□□□ 0.7
TRIM47-207ENST00000593089 C20orf96Q9NUD7 363 aaPredicted RBP19.42■□□□□ 0.7
TRIM47-207ENST00000593089 MKL2Q9ULH7 1088 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 DHRS7Q9Y394 339 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 MRPS2Q9Y399 296 aaKnown RBP19.42■□□□□ 0.7
TRIM47-207ENST00000593089 MAD1L1Q9Y6D9 718 aa19.42■□□□□ 0.7
TRIM47-207ENST00000593089 CPAMD8Q8IZJ3 1885 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 A0A1W2PQ72 361 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 GFYI3L273 518 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 JRKO75564 520 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 ITGAMP11215 1152 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 ENO3P13929 434 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-207ENST00000593089 IMPA1P29218 277 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 AVPR1BP47901 424 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 TNFSF10P50591 281 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 EFNA3P52797 238 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 RELAQ04206 551 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 PCOLCEQ15113 449 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 NDUFA9Q16795 377 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 LONRF1Q17RB8 773 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 UBE2R2Q712K3 238 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-207ENST00000593089 CPNE9Q8IYJ1 553 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 MCUQ8NE86 351 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 CD200R1Q8TD46 325 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 MS4A14Q96JA4 679 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 EBNA1BP2Q99848 306 aaKnown RBP19.41■□□□□ 0.7
TRIM47-207ENST00000593089 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM47-207ENST00000593089 KLHL42Q9P2K6 505 aa19.41■□□□□ 0.7
TRIM47-207ENST00000593089 DIDO1Q9BTC0 2240 aaKnown RBP19.41■□□□□ 0.7
TRIM47-207ENST00000593089 LOC102723996A0A087X1L8 192 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 TRAV17A0A0B4J275 112 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 PCDH17O14917 1159 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 SKIV2L2P42285 1042 aaKnown RBP19.4■□□□□ 0.7
TRIM47-207ENST00000593089 MPP1Q00013 466 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 FAM53BQ14153 422 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 RIPOR1Q6ZS17 1223 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 LRRC8AQ8IWT6 810 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 AGGF1Q8N302 714 aaeCLIP19.4■□□□□ 0.7
TRIM47-207ENST00000593089 OR9A4Q8NGU2 314 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 HAS2Q92819 552 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 TAAR6Q96RI8 345 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 ZNF700Q9H0M5 742 aa19.4■□□□□ 0.7
TRIM47-207ENST00000593089 ZG16O60844 167 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 HAUS5O94927 633 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 WDPCPO95876 746 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 C8orf89P0DMQ9 161 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 COILP38432 576 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-207ENST00000593089 MFSD4BQ5TF39 518 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 HIBCHQ6NVY1 386 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-207ENST00000593089 CCDC137Q6PK04 289 aaKnown RBP19.39■□□□□ 0.69
TRIM47-207ENST00000593089 TMEM205Q6UW68 189 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 FJX1Q86VR8 437 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 LMNTD2Q8IXW0 634 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 RASGEF1CQ8N431 466 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 CALML6Q8TD86 181 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 MACROD1Q9BQ69 325 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 CCDC177Q9NQR7 707 aaPredicted RBP19.39■□□□□ 0.69
TRIM47-207ENST00000593089 TMEM184CQ9NVA4 438 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 FBXO5Q9UKT4 447 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 COMMD10Q9Y6G5 202 aa19.39■□□□□ 0.69
TRIM47-207ENST00000593089 STSP08842 583 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 TDGF1P3P51864 188 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 KCNK10P57789 538 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 TBPL1P62380 186 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 CCZ1BP86790 482 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 CCZ1P86791 482 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-207ENST00000593089 ZRSR2Q15696 482 aaKnown RBP19.38■□□□□ 0.69
TRIM47-207ENST00000593089 HSP90AA5PQ58FG0 334 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 C1QL3Q5VWW1 255 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 ZNF324BQ6AW86 544 aaPredicted RBP19.38■□□□□ 0.69
TRIM47-207ENST00000593089 PRSS41Q7RTY9 318 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 VN1R4Q7Z5H5 301 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 SHISA5Q8N114 240 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 METTL21AQ8WXB1 218 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 AARSD1Q9BTE6 412 aaKnown RBP19.38■□□□□ 0.69
TRIM47-207ENST00000593089 TUBB6Q9BUF5 446 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 IARS2Q9NSE4 1012 aaKnown RBP19.38■□□□□ 0.69
TRIM47-207ENST00000593089 ADAMTS6Q9UKP5 1117 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 PPP2R2CQ9Y2T4 447 aa19.38■□□□□ 0.69
TRIM47-207ENST00000593089 IGHV3-20A0A0C4DH32 117 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 H0YIG0 161 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 SEC24DO94855 1032 aaPredicted RBP19.37■□□□□ 0.69
TRIM47-207ENST00000593089 ICAM2P13598 275 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 MAGEA3P43357 314 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 RPS15AP62244 130 aaKnown RBP19.37■□□□□ 0.69
TRIM47-207ENST00000593089 AP2B1P63010 937 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 SRSF11Q05519 484 aaKnown RBP19.37■□□□□ 0.69
TRIM47-207ENST00000593089 ZNF33BQ06732 778 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 INAQ16352 499 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 MINDY4Q4G0A6 757 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 ABHD17BQ5VST6 288 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 LANCL3Q6ZV70 420 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 NAT8LQ8N9F0 302 aa19.37■□□□□ 0.69
TRIM47-207ENST00000593089 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRIM47-207ENST00000593089 MCOLN3Q8TDD5 553 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms