RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CYS1Q717R9 158 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 STRA8Q7Z7C7 330 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 MYO1HQ8N1T3 1032 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PDLIM5Q96HC4 596 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 SELENOSQ9BQE4 189 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ACAT2Q9BWD1 397 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 RHOJQ9H4E5 214 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PARVBQ9HBI1 364 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 MRPS30Q9NP92 439 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 SLC22A11Q9NSA0 550 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 STARD5Q9NSY2 213 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ZDHHC18Q9NUE0 388 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 STOX2Q9P2F5 926 aaPredicted RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 DHCR7Q9UBM7 475 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 TAC3Q9UHF0 121 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 TUBD1Q9UJT1 453 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 IKZF3Q9UKT9 509 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 TCFL5Q9UL49 500 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 POLHQ9Y253 713 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 KCNMB2Q9Y691 235 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 LOC105369274A0A096LPK9 316 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 KRTAP4-8A0A0G2JLE6 195 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 LOC102723532A0A0G2JNH3 316 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 FAM95CA0A1B0GW59 222 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 ESYT3A0FGR9 886 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 FAM159BA6NKW6 160 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 SRPX2O60687 465 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 CNOT3O75175 753 aaKnown RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 KLF7O75840 302 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 PIAS1O75925 651 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 CCNDBP1O95273 360 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 WISP3O95389 354 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 MED26O95402 600 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 SYF2O95926 243 aaKnown RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 GSTA2P09210 222 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF37AP17032 561 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 AGXTP21549 392 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 TAS2R39P59534 338 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 TBPL1P62380 186 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 ABATP80404 500 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 SLC7A5Q01650 507 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 GUCY2DQ02846 1103 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 RELAQ04206 551 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 COL9A2Q14055 689 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 GRM7Q14831 915 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 ZXDCQ2QGD7 858 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 PRTGQ2VWP7 1150 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 TCTE1Q5JU00 501 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 NUP210LQ5VU65 1888 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 C1orf189Q5VU69 101 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 FAM69BQ5VUD6 431 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 YOD1Q5VVQ6 348 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 SBSNQ6UWP8 590 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 OR4N4Q8N0Y3 316 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 MCOLN3Q8TDD5 553 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 APOBEC4Q8WW27 367 aaKnown RBP10.71□□□□□ -0.69
SMAD4-211ENST00000590499 VPS39Q96JC1 886 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 CCDC138Q96M89 665 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 ZFYVE21Q9BQ24 234 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 LRRC1Q9BTT6 524 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 NDC1Q9BTX1 674 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 DHRS4Q9BTZ2 278 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 SLC7A5P2Q9GIP4 190 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 NSMCE4AQ9NXX6 385 aa10.71□□□□□ -0.69
SMAD4-211ENST00000590499 A0A0J9YVX5 310 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 A0A1B0GX78 115 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 C9J4A7 227 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 DSCR3O14972 297 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 TUBB4AP04350 444 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 SFTPCP11686 197 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ADH7P40394 386 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 PMS2P54278 862 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ARSFP54793 590 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 AP1S2P56377 157 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 VSX2P58304 361 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 DCDP81605 110 aaKnown RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 C19orf57Q0VDD7 668 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 KCNAB2Q13303 367 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ZNF460Q14592 562 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 PPP1R3AQ16821 1122 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 NKAIN1Q4KMZ8 207 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 WASHC2DQ5SRD0 308 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 AGTRAPQ6RW13 159 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 COX15Q7KZN9 410 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 APLFQ8IW19 511 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 CEP97Q8IW35 865 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 PALM2Q8IXS6 379 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ARHGEF39Q8N4T4 335 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 MMGT1Q8N4V1 131 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 NOA1Q8NC60 698 aaKnown RBP10.7□□□□□ -0.7
SMAD4-211ENST00000590499 THAP4Q8WY91 577 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 ANKRD7Q92527 254 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 C10orf90Q96M02 699 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 OR2A5Q96R48 311 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 C17orf62Q9BQA9 187 aa10.7□□□□□ -0.7
SMAD4-211ENST00000590499 SGPP1Q9BX95 441 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms