RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 AVPR1BP47901 424 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 AP2B1P63010 937 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 FAM53BQ14153 422 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 ZNF787Q6DD87 383 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 CCDC137Q6PK04 289 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 RIPOR1Q6ZS17 1223 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 UBE2R2Q712K3 238 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 PLD3Q8IV08 490 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 SIRT6Q8N6T7 355 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 BCORP1Q8N888 145 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 MS4A14Q96JA4 679 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 PBKQ96KB5 322 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 GPR21Q99679 349 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 OLAHQ9NV23 265 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 MKL2Q9ULH7 1088 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 PPP2R2CQ9Y2T4 447 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 MED16Q9Y2X0 877 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 LRBAP50851 2863 aa17.03■□□□□ 0.32
PRKCSH-211ENST00000590098 TRAV17A0A0B4J275 112 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 A0A1W2PQ72 361 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 H7BY64 318 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 E2F3O00716 465 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 P2RX6O15547 441 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 FOXS1O43638 330 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 ICAM2P13598 275 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 HRH2P25021 359 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 SOX11P35716 441 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 COILP38432 576 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 DCTP40126 519 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 SYT16Q17RD7 645 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 CYHR1Q6ZMK1 362 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 SPNS2Q8IVW8 549 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 CPNE9Q8IYJ1 553 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 RASGEF1CQ8N431 466 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 CD200R1Q8TD46 325 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 METTL21AQ8WXB1 218 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 PSMF1Q92530 271 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 HAS2Q92819 552 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 PRAP1Q96NZ9 151 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 FAM167BQ9BTA0 163 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 CCDC177Q9NQR7 707 aaPredicted RBP17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 TMEM184CQ9NVA4 438 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 PLA2G3Q9NZ20 509 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 FBXO5Q9UKT4 447 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 MRPS2Q9Y399 296 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 JRKLQ9Y4A0 524 aa17.02■□□□□ 0.32
PRKCSH-211ENST00000590098 LOC102723996A0A087X1L8 192 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 EIF3FO00303 357 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 HAUS5O94927 633 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 IMPA1P29218 277 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 TNFSF10P50591 281 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 RPS15AP62244 130 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 CCZ1BP86790 482 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 LRRC8EQ6NSJ5 796 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 UGT3A1Q6NUS8 523 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 PIWIL4Q7Z3Z4 852 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 ZC3H7AQ8IWR0 971 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 PALM2Q8IXS6 379 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 LRRC56Q8IYG6 542 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 ARHGEF39Q8N4T4 335 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 AMER2Q8N7J2 671 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 GABPB2Q8TAK5 448 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 MCOLN3Q8TDD5 553 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 SLX1AQ9BQ83 275 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 AARSD1Q9BTE6 412 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 ZNF700Q9H0M5 742 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 PCBD2Q9H0N5 130 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 TRMT6Q9UJA5 497 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 CPAMD8Q8IZJ3 1885 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 SCN2AQ99250 2005 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 SCN3AQ9NY46 2000 aa17.01■□□□□ 0.31
PRKCSH-211ENST00000590098 H0YIG0 161 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 JRKO75564 520 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 C8orf89P0DMQ9 161 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 RGS4P49798 205 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 MPP1Q00013 466 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 MAT1AQ00266 395 aaKnown RBP17■□□□□ 0.31
PRKCSH-211ENST00000590098 PTK6Q13882 451 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 PCOLCEQ15113 449 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 INAQ16352 499 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 CYP1B1Q16678 543 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 HSP90AA5PQ58FG0 334 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 MFSD4BQ5TF39 518 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 TMEM205Q6UW68 189 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 NAT8LQ8N9F0 302 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 OR9A4Q8NGU2 314 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 SUN3Q8TAQ9 357 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 GRK7Q8WTQ7 553 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 CCDC138Q96M89 665 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 TUBB6Q9BUF5 446 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 IARS2Q9NSE4 1012 aaKnown RBP17■□□□□ 0.31
PRKCSH-211ENST00000590098 NEU2Q9Y3R4 380 aa17■□□□□ 0.31
PRKCSH-211ENST00000590098 KCNE1BA0A087WTH5 132 aa16.99■□□□□ 0.31
PRKCSH-211ENST00000590098 A0A1B0GUH1 482 aa16.99■□□□□ 0.31
PRKCSH-211ENST00000590098 PGRMC1O00264 195 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms