RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ST6GALNAC3Q8NDV1 305 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 BRIX1Q8TDN6 353 aaKnown RBP17.09■□□□□ 0.33
H3F3B-209ENST00000589949 MVB12AQ96EY5 273 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 LMF1Q96S06 567 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 YIPF2Q9BWQ6 316 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 TGIF2Q9GZN2 237 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 DRC3Q9H069 523 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 IARS2Q9NSE4 1012 aaKnown RBP17.09■□□□□ 0.33
H3F3B-209ENST00000589949 PLA2G3Q9NZ20 509 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 CDC14AQ9UNH5 594 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 SLC5A6Q9Y289 635 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 ITPR2Q14571 2701 aa17.08■□□□□ 0.33
H3F3B-209ENST00000589949 NSG1A0A0A6YYJ2 146 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 ENO3P13929 434 aaPredicted RBP17.08■□□□□ 0.32
H3F3B-209ENST00000589949 ABATP80404 500 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 PCOLCEQ15113 449 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 RBM20Q5T481 1227 aaKnown RBP17.08■□□□□ 0.32
H3F3B-209ENST00000589949 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 B3GNTL1Q67FW5 361 aaPredicted RBP17.08■□□□□ 0.32
H3F3B-209ENST00000589949 ADCK2Q7Z695 626 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 LURAP1LQ8IV03 231 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 IGDCC3Q8IVU1 814 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 KBTBD2Q8IY47 623 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 SLC35F6Q8N357 371 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 SIRT6Q8N6T7 355 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 OR9A4Q8NGU2 314 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 EEF1AKMT1Q8WVE0 214 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 FAR1Q8WVX9 515 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 OSBPL9Q96SU4 736 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 CCDC68Q9H2F9 335 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 EPS8L2Q9H6S3 715 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 SLC17A6Q9P2U8 582 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 PDE10AQ9Y233 779 aa17.08■□□□□ 0.32
H3F3B-209ENST00000589949 CENPEQ02224 2701 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 LOC102723996A0A087X1L8 192 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 OR2W5A6NFC9 320 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 PGRMC1O00264 195 aaKnown RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 ZBTB14O43829 449 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 CCNDBP1O95273 360 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 F10P00742 488 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 ITGAMP11215 1152 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 CDKN2DP55273 166 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 TBPL1P62380 186 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 SRSF11Q05519 484 aaKnown RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 CRYMQ14894 314 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 TLR1Q15399 786 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 TMEM205Q6UW68 189 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 MAMDC2Q7Z304 686 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 PPIL6Q8IXY8 311 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 C2CD4AQ8NCU7 369 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 RERGQ96A58 199 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 CCDC138Q96M89 665 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 TAAR6Q96RI8 345 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 MKKSQ9NPJ1 570 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-209ENST00000589949 AGPAT4Q9NRZ5 378 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 CROCCQ5TZA2 2017 aa17.07■□□□□ 0.32
H3F3B-209ENST00000589949 ZNF839A8K0R7 811 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 LCMT2O60294 686 aaKnown RBP17.06■□□□□ 0.32
H3F3B-209ENST00000589949 BMP10O95393 424 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 SERPINA7P05543 415 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 HEXBP07686 556 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 CSNK1G2P78368 415 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 FAM53BQ14153 422 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 PHKG1Q16816 387 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 ZNF324BQ6AW86 544 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-209ENST00000589949 PAQR3Q6TCH7 311 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 LMNTD2Q8IXW0 634 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 OR1N1Q8NGS0 311 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 ACTRT1Q8TDG2 376 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 VPS50Q96JG6 964 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 IMMP1LQ96LU5 166 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 C5orf34Q96MH7 638 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 SLX1AQ9BQ83 275 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 VN1R1Q9GZP7 353 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 ZNF700Q9H0M5 742 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 ATG10Q9H0Y0 220 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 TMEM184CQ9NVA4 438 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 C14orf105Q9NVL8 296 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 MKL2Q9ULH7 1088 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 COMMD10Q9Y6G5 202 aa17.06■□□□□ 0.32
H3F3B-209ENST00000589949 IGHV3-20A0A0C4DH32 117 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 FEZF1A0PJY2 475 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 TSPAN12O95859 305 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 AHSGP02765 367 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 ANXA5P08758 320 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 PGAM1P18669 254 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 IVDP26440 423 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 DCTP40126 519 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 BCL6P41182 706 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 FNTAP49354 379 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 TNFSF10P50591 281 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
H3F3B-209ENST00000589949 ELOAQ14241 798 aaKnown RBP17.05■□□□□ 0.32
H3F3B-209ENST00000589949 LANCL3Q6ZV70 420 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 PDSS2Q86YH6 399 aa17.05■□□□□ 0.32
H3F3B-209ENST00000589949 CALML6Q8TD86 181 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 403.5 ms