RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SLC22A9Q8IVM8 553 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 ABHD11Q8NFV4 315 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 OR8K5Q8NH50 307 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 RDH11Q8TC12 318 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 GATA6Q92908 595 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 TMEM237Q96Q45 408 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 AIF1LQ9BQI0 150 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 ZPBPQ9BS86 351 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 CAPS2Q9BXY5 557 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 SPNS1Q9H2V7 528 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 ACSS2Q9NR19 701 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 STARD5Q9NSY2 213 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 SERTAD3Q9UJW9 196 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 PCTPQ9UKL6 214 aa21.49■■□□□ 1.03
R3HDM4-205ENST00000589445 E2F3O00716 465 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 ZSCAN9O15535 394 aaPredicted RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 DXOO77932 396 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 KIAA0754O94854 1291 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 RPS17P08708 135 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 CPA3P15088 417 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 BCL6P41182 706 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 RPS15AP62244 130 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 HERVK_113P63132 956 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 IRF8Q02556 426 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 CHIT1Q13231 466 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 TBC1D25Q3MII6 688 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 PWWP2BQ6NUJ5 590 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 IGF2-ASQ6U949 168 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 SLCO4C1Q6ZQN7 724 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 RPS27LQ71UM5 84 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 PPP4R1Q8TF05 950 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 COL26A1Q96A83 441 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 NSUN5Q96P11 429 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 ERVK-6Q9BXR3 956 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 CCDC86Q9H6F5 360 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 VIPAS39Q9H9C1 493 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 KCNK9Q9NPC2 374 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 PILRAQ9UKJ1 303 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 PLLPQ9Y342 182 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 PCDHGA3Q9Y5H0 932 aa21.48■■□□□ 1.03
R3HDM4-205ENST00000589445 LOC105369274A0A096LPK9 316 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 LOC102723532A0A0G2JNH3 316 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 TRBC2A0A5B9 178 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 CDRT15L2A8MXV6 281 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 G3V2L1 256 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 AGPSO00116 658 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 OR1F1O43749 312 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 KATNA1O75449 491 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 STK17BO94768 372 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ATXN8OSP0DMR3 200 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 C1GALT1C1LP0DN25 315 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ZNF28P17035 718 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 EPORP19235 508 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 CYP4F2P78329 520 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 RBBP5Q15291 538 aaKnown RBP21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 PRAMEF17Q5VTA0 474 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ATG9BQ674R7 924 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 OR4N4Q8N0Y3 316 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ZNF655Q8N720 491 aaPredicted RBP21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 CSNK1A1LQ8N752 337 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 CCNYL1Q8N7R7 359 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ZNF740Q8NDX6 193 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ATP6V1E2Q96A05 226 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 CCDC126Q96EE4 140 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 SPRTNQ9H040 489 aaPredicted RBP21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ACBD3Q9H3P7 528 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 ACTR8Q9H981 624 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 SYNPO2LQ9H987 977 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 SEMA4BQ9NPR2 832 aaPredicted RBP21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 GEMIN8Q9NWZ8 242 aaKnown RBP21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 PCDHGA7Q9Y5G6 932 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 SPTBP11277 2137 aa21.47■■□□□ 1.03
R3HDM4-205ENST00000589445 TMEM8BA6NDV4 472 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 H0YGG7 62 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 NVLO15381 856 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 TYROBPO43914 113 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 CPNE3O75131 537 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 H2AFYO75367 372 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 SUPT7LO94864 414 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 SERPIND1P05546 499 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 TSPAN8P19075 237 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ARF3P61204 181 aaPredicted RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 MAGOHP61326 146 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 DOC2AQ14183 400 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 PCLAFQ15004 111 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 TNFAIP8L3Q5GJ75 292 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 BPHLQ86WA6 291 aaPredicted RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ZFAND4Q86XD8 727 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 TTC29Q8NA56 475 aaPredicted RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 CLIP3Q96DZ5 547 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 PTCD3Q96EY7 689 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ZNF578Q96N58 590 aaPredicted RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 NOL11Q9H8H0 719 aaKnown RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 IPPKQ9H8X2 491 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ACTR5Q9H9F9 607 aaPredicted RBP21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 COPG2Q9UBF2 871 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 PCDHGA4Q9Y5G9 962 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ACTL7BQ9Y614 415 aa21.46■■□□□ 1.03
R3HDM4-205ENST00000589445 ZZEF1O43149 2961 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms