RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, human

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPTM1-210	ENST00000589158	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ADAMTS17	Q8TE56	1095 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	PTER	Q96BW5	349 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ABHD17A	Q96GS6	310 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TSNARE1	Q96NA8	513 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	OR4K3	Q96R72	315 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	YIPF2	Q9BWQ6	316 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC25A18	Q9H1K4	315 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ACSS2	Q9NR19	701 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CDC14A	Q9UNH5	594 aa		13.44	□□□□□ -0.26
CLPTM1-210	ENST00000589158	KALRN	O60229	2985 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	KCNE1B	A0A087WTH5	132 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MKRN2OS	H3BPM6	223 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	PEX12	O00623	359 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	P2RX6	O15547	441 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	DNAJB5	O75953	348 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ONECUT2	O95948	504 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	RHOXF2B	P0C7M4	288 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CD1D	P15813	335 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	FBL	P22087	321 aa	Known RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ECHS1	P30084	290 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	HNMT	P50135	292 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CCL11	P51671	97 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MEF2A	Q02078	507 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ATP1A4	Q13733	1029 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	BMPR2	Q13873	1038 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TGFBI	Q15582	683 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	NKG7	Q16617	165 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	NDUFA9	Q16795	377 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	UBAP2	Q5T6F2	1119 aa	Known RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MROH9	Q5TGP6	573 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	GARNL3	Q5VVW2	1013 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SHISA6	Q6ZSJ9	500 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	COX15	Q7KZN9	410 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	GPSM1	Q86YR5	675 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	APLF	Q8IW19	511 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TBC1D19	Q8N5T2	526 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC5A11	Q8WWX8	675 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	THAP11	Q96EK4	314 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MMAB	Q96EY8	250 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MACROD1	Q9BQ69	325 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	RHOXF2	Q9BQY4	288 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TRIM55	Q9BYV6	548 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ING2	Q9H160	280 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SOX17	Q9H6I2	414 aa	Predicted RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ACSS3	Q9H6R3	686 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	WDR54	Q9H977	334 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CTSF	Q9UBX1	484 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	NFU1	Q9UMS0	254 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC22A14	Q9Y267	594 aa		13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SMG1	Q96Q15	3661 aa	Known RBP	13.43	□□□□□ -0.26
CLPTM1-210	ENST00000589158		A0A0A6YYC8	382 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158		B8ZZF3	427 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158		I3L1I5	382 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	PRPF4	O43172	522 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	OR1F1	O43749	312 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	LCMT2	O60294	686 aa	Known RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	WDR47	O94967	919 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	S100B	P04271	92 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	UMOD	P07911	640 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC35E2B	P0CK96	405 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	GMPR	P36959	345 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	BCL6	P41182	706 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	GDF5	P43026	501 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	OCA2	Q04671	838 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	OR4D1	Q15615	310 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	C18orf21	Q32NC0	220 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CATSPERE	Q5SY80	951 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	VN1R4	Q7Z5H5	301 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	MRGPRE	Q86SM8	312 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ZNF605	Q86T29	641 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ASPG	Q86U10	573 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	TMEM151B	Q8IW70	566 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	PRSS58	Q8IYP2	241 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CAMKV	Q8NCB2	501 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ABHD11	Q8NFV4	315 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	UHMK1	Q8TAS1	419 aa	Known RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC13A3	Q8WWT9	602 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	EXT2	Q93063	718 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	NEIL2	Q969S2	332 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	UBXN10	Q96LJ8	280 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	IP6K3	Q96PC2	410 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	DRC3	Q9H069	523 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SLC26A1	Q9H2B4	701 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	WWOX	Q9NZC7	414 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	CD274	Q9NZQ7	290 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	NXT1	Q9UKK6	140 aa	Known RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	RNF112	Q9ULX5	631 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	ACOT9	Q9Y305	439 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	KCNE2	Q9Y6J6	123 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	IKBKG	Q9Y6K9	419 aa		13.42	□□□□□ -0.26
CLPTM1-210	ENST00000589158	FFAR3	O14843	346 aa		13.41	□□□□□ -0.26
CLPTM1-210	ENST00000589158	GPR42	O15529	346 aa		13.41	□□□□□ -0.26
CLPTM1-210	ENST00000589158	SERPIND1	P05546	499 aa		13.41	□□□□□ -0.26
CLPTM1-210	ENST00000589158	INHBA	P08476	426 aa		13.41	□□□□□ -0.26

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