RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 I3L1I5 382 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 STATHP02808 62 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 ANXA5P08758 320 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 FNTAP49354 379 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 EFNA3P52797 238 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 EMP2P54851 167 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 RELAQ04206 551 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 CDC16Q13042 620 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 ELOAQ14241 798 aaKnown RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 CRYMQ14894 314 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 B3GNTL1Q67FW5 361 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 FAAH2Q6GMR7 532 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 KBTBD2Q8IY47 623 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 SLC35F6Q8N357 371 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 ACTRT1Q8TDG2 376 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 MKKSQ9NPJ1 570 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 CCDC177Q9NQR7 707 aaPredicted RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 IARS2Q9NSE4 1012 aaKnown RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 ADAMTS6Q9UKP5 1117 aa17.83■□□□□ 0.44
TRIM47-205ENST00000587774 MRPS2Q9Y399 296 aaKnown RBP17.83■□□□□ 0.44
TRIM47-205ENST00000587774 IGHV1-45A0A0A0MS14 117 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 H7BY64 318 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 EIF3FO00303 357 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 E2F3O00716 465 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 BANF1O75531 89 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 PRR35P0CG20 571 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 PGAM1P18669 254 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 MAT1AQ00266 395 aaKnown RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 TIAL1Q01085 375 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 TLR1Q15399 786 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 PPP1R7Q15435 360 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 MBOAT1Q6ZNC8 495 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 NDUFAF7Q7L592 441 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 ZC3H7AQ8IWR0 971 aaKnown RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 C2CD4AQ8NCU7 369 aaPredicted RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 ST6GALNAC3Q8NDV1 305 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 BRIX1Q8TDN6 353 aaKnown RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 GRHL3Q8TE85 626 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 PSMF1Q92530 271 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 PRAP1Q96NZ9 151 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 EBNA1BP2Q99848 306 aaKnown RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 TGIF2Q9GZN2 237 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 TRMT6Q9UJA5 497 aaKnown RBP17.82■□□□□ 0.44
TRIM47-205ENST00000587774 SH2B3Q9UQQ2 575 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 SLC5A6Q9Y289 635 aa17.82■□□□□ 0.44
TRIM47-205ENST00000587774 GTF3C1Q12789 2109 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 GOLGA6L10A0A0M3HER8 536 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 WIPF3A6NGB9 483 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 TXNDC9O14530 226 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 HEXBP07686 556 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 CELA2AP08217 269 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 CXCR2P25025 360 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 SOX11P35716 441 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 PTK6Q13882 451 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 FAM53BQ14153 422 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 PRSS41Q7RTY9 318 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 VN1R4Q7Z5H5 301 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 CATSPER1Q8NEC5 780 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 EEF1AKMT1Q8WVE0 214 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 C5orf34Q96MH7 638 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 LMF1Q96S06 567 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 PTGFRNQ9P2B2 879 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 PCNX1Q96RV3 2341 aa17.81■□□□□ 0.44
TRIM47-205ENST00000587774 CLDN1O95832 211 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 DHX9Q08211 1270 aaKnown RBP17.8■□□□□ 0.44
TRIM47-205ENST00000587774 RBM20Q5T481 1227 aaKnown RBP17.8■□□□□ 0.44
TRIM47-205ENST00000587774 LRRC8EQ6NSJ5 796 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 SIRT6Q8N6T7 355 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 AMER2Q8N7J2 671 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 OR9A4Q8NGU2 314 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 DDX47Q9H0S4 455 aaKnown RBP17.8■□□□□ 0.44
TRIM47-205ENST00000587774 TMEM184CQ9NVA4 438 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 RIC8BQ9NVN3 520 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 ASIC3Q9UHC3 531 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 MKL2Q9ULH7 1088 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 SNX12Q9UMY4 172 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 PDE10AQ9Y233 779 aa17.8■□□□□ 0.44
TRIM47-205ENST00000587774 LOC102723996A0A087X1L8 192 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 DNALI1O14645 258 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-205ENST00000587774 SERPINA7P05543 415 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 C8GP07360 202 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 FDXRP22570 491 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 GABRB3P28472 473 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 AVPR1BP47901 424 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 CDKN2DP55273 166 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 RPS15AP62244 130 aaKnown RBP17.79■□□□□ 0.44
TRIM47-205ENST00000587774 ARG2P78540 354 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 PCOLCEQ15113 449 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 NDUFA9Q16795 377 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 MSS51Q4VC12 460 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 UGT3A1Q6NUS8 523 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 MAMDC2Q7Z304 686 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-205ENST00000587774 SHISA5Q8N114 240 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 FAR1Q8WVX9 515 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 CCDC138Q96M89 665 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 MACROD1Q9BQ69 325 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 TAS2R13Q9NYV9 303 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 SLC17A6Q9P2U8 582 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 MYO9AB2RTY4 2548 aa17.79■□□□□ 0.44
TRIM47-205ENST00000587774 H0YIG0 161 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms