RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NRP2O60462 931 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 CCNDBP1O95273 360 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 KRT6AP02538 564 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 KRT6BP04259 564 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 PVRP15151 417 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 HRH2P25021 359 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 HMOX2P30519 316 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 LSSP48449 732 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 KRT6CP48668 564 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 LIMK1P53667 647 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 CFHR1Q03591 330 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 TUBB3Q13509 450 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 PDCD2Q16342 344 aaPredicted RBP14.34□□□□□ -0.11
NFIX-208ENST00000587260 SLC9B1Q4ZJI4 515 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 SNAP47Q5SQN1 464 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 CATSPEREQ5SY80 951 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 KIAA1614Q5VZ46 1190 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 ADCK2Q7Z695 626 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
NFIX-208ENST00000587260 NETO1Q8TDF5 533 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 ACTRT2Q8TDY3 377 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 C19orf60Q96EN9 201 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
NFIX-208ENST00000587260 CCDC28BQ9BUN5 200 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 LRRN3Q9H3W5 708 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 EPB41L1Q9H4G0 881 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 SLC6A20Q9NP91 592 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 MRPS30Q9NP92 439 aaKnown RBP14.34□□□□□ -0.11
NFIX-208ENST00000587260 SNX6Q9UNH7 406 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 FIS1Q9Y3D6 152 aa14.34□□□□□ -0.11
NFIX-208ENST00000587260 COL27A1Q8IZC6 1860 aaPredicted RBP14.34□□□□□ -0.11
NFIX-208ENST00000587260 MANBAO00462 879 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 PIP5K1BO14986 540 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 KIF1CO43896 1103 aaKnown RBP14.33□□□□□ -0.12
NFIX-208ENST00000587260 DIAPH2O60879 1101 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 VPS4BO75351 444 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 ULK1O75385 1050 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 MAGP20916 626 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 CDH3P22223 829 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 VARSP26640 1264 aaKnown RBP14.33□□□□□ -0.12
NFIX-208ENST00000587260 CMPK1P30085 196 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
NFIX-208ENST00000587260 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.12
NFIX-208ENST00000587260 ZRSR2Q15696 482 aaKnown RBP14.33□□□□□ -0.12
NFIX-208ENST00000587260 CPSF6Q16630 551 aaKnown RBP eCLIP14.33□□□□□ -0.12
NFIX-208ENST00000587260 XKR7Q5GH72 579 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 PAGE2BQ5JRK9 111 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 METTL21CQ5VZV1 264 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 TMPRSS9Q7Z410 1059 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 TRIM46Q7Z4K8 759 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 LAS2Q8IYD9 372 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 WDR20Q8TBZ3 569 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 NT5DC2Q9H857 520 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 GEMIN8Q9NWZ8 242 aaKnown RBP14.33□□□□□ -0.12
NFIX-208ENST00000587260 PCDHGA11Q9Y5H2 935 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 KLK4Q9Y5K2 254 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.12
NFIX-208ENST00000587260 IGKV1-8A0A0C4DH67 115 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 A0A0J9YY10 115 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 NPIPB8E9PQR5 432 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 SKAP2O75563 359 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 RASSF9O75901 435 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 GP1BAP07359 652 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 HOXB3P14651 431 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 CXCR2P25025 360 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 CCR8P51685 355 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 ABRAXAS2Q15018 415 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 SLC5A12Q1EHB4 618 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 TCHHL1Q5QJ38 904 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 FRG2Q64ET8 278 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 LARP4Q71RC2 724 aaKnown RBP eCLIP14.32□□□□□ -0.12
NFIX-208ENST00000587260 CEP70Q8NHQ1 597 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 UBE2E3Q969T4 207 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 REPS1Q96D71 796 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 ZDHHC12Q96GR4 267 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 C3orf30Q96M34 536 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 FRG2BQ96QU4 278 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 GFM1Q96RP9 751 aaKnown RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 MAP3K3Q99759 626 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 DPH7Q9BTV6 452 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 SARGQ9BW04 601 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 SPNS1Q9H2V7 528 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 WDR55Q9H6Y2 383 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 TCF7L2Q9NQB0 619 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 TMEM184CQ9NVA4 438 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 ZNF490Q9ULM2 529 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 DMXL1Q9Y485 3027 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 RIF1Q5UIP0 2472 aaKnown RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 CFAP54Q96N23 3096 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 MN1Q10571 1320 aaPredicted RBP14.32□□□□□ -0.12
NFIX-208ENST00000587260 FAM186AA6NE01 2351 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 HEATR5BQ9P2D3 2071 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 UNC13CQ8NB66 2214 aa14.32□□□□□ -0.12
NFIX-208ENST00000587260 H7BY64 318 aa14.31□□□□□ -0.12
NFIX-208ENST00000587260 AGRPO00253 132 aa14.31□□□□□ -0.12
NFIX-208ENST00000587260 RFPL3O75679 317 aa14.31□□□□□ -0.12
NFIX-208ENST00000587260 CPNE6O95741 557 aa14.31□□□□□ -0.12
NFIX-208ENST00000587260 ST6GAL1P15907 406 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms