RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CT55Q8WUE5 264 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 ZNF775Q96BV0 537 aaPredicted RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 DCUN1D1Q96GG9 259 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 RILPQ96NA2 401 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 BIRC8Q96P09 236 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 TEFMQ96QE5 360 aaKnown RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 VPS35Q96QK1 796 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 COPS8Q99627 209 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 GPR21Q99679 349 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 GATA5Q9BWX5 397 aaPredicted RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 TWSG1Q9GZX9 223 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 OR2AG1Q9H205 316 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 BPIFA1Q9NP55 256 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 SARS2Q9NP81 518 aaKnown RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 IL26Q9NPH9 171 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 LATS2Q9NRM7 1088 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 KLC4Q9NSK0 619 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 NUDT4Q9NZJ9 180 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 ATXN10Q9UBB4 475 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 CPNE7Q9UBL6 633 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 HEY2Q9UBP5 337 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 LNPEPQ9UIQ6 1025 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 RNF112Q9ULX5 631 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 DHRS7Q9Y394 339 aa7.57□□□□□ -1.2
VMP1-204ENST00000587259 TNPO3Q9Y5L0 923 aaKnown RBP7.57□□□□□ -1.2
VMP1-204ENST00000587259 IGLV3-16A0A075B6K0 115 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 PIPSLA2A3N6 862 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 OR52A4PA6NMU1 304 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 A8MT66 165 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MKRN2OSH3BPM6 223 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MYO1CO00159 1063 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 CAPN5O15484 640 aaPredicted RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 DLX3O60479 287 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 RASSF9O75901 435 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MLYCDO95822 493 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 FTH1P02794 183 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 ENO2P09104 434 aaPredicted RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 F3P13726 295 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 GFAPP14136 432 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 TEAD1P28347 426 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 SERPINB3P29508 390 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 PIK3CGP48736 1102 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 NAGLUP54802 743 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 ALDH18A1P54886 795 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 UBE2IP63279 158 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 DLG1Q12959 904 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 IL10RAQ13651 578 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 KHDC1Q4VXA5 237 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 CDKL4Q5MAI5 379 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 CTSL3PQ5NE16 218 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 LDLRAP1Q5SW96 308 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 TCTN3Q6NUS6 607 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 FRMD7Q6ZUT3 714 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 SLC9B2Q86UD5 537 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MTDHQ86UE4 582 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 PIANPQ8IYJ0 282 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 TCAIMQ8N3R3 496 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 ESX1Q8N693 406 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 RFWD2Q8NHY2 731 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 CD200R1Q8TD46 325 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 NAT14Q8WUY8 206 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 KLHL29Q96CT2 875 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 EID2BQ96D98 161 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 LINGO1Q96FE5 620 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 SORT1Q99523 831 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 CCT7Q99832 543 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 DPYSL5Q9BPU6 564 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 CCDC28BQ9BUN5 200 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 REPIN1Q9BWE0 567 aaKnown RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 C1QTNF3Q9BXJ4 246 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MYLK2Q9H1R3 596 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 ALG9Q9H6U8 611 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.56□□□□□ -1.2
VMP1-204ENST00000587259 ZNF624Q9P2J8 865 aaPredicted RBP7.56□□□□□ -1.2
VMP1-204ENST00000587259 CDYLQ9Y232 598 aa7.56□□□□□ -1.2
VMP1-204ENST00000587259 MN1Q10571 1320 aaPredicted RBP7.55□□□□□ -1.2
VMP1-204ENST00000587259 KLHL33A6NCF5 533 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 SUPT3HB4E1H0 165 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 MATN2O00339 956 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 BTN3A1O00481 513 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 FCHO1O14526 889 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 GAPDHSO14556 408 aaPredicted RBP7.55□□□□□ -1.2
VMP1-204ENST00000587259 GRID2O43424 1007 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 ITM2AO43736 263 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 ZBTB14O43829 449 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 KLK8O60259 260 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 DIAPH2O60879 1101 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 NIPSNAP2O75323 286 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 VPS4BO75351 444 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 SUPT3HO75486 399 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 CREG1O75629 220 aa7.55□□□□□ -1.2
VMP1-204ENST00000587259 UBXN7O94888 489 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms