RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 IRAK4Q9NWZ3 460 aa18.34■□□□□ 0.53
DDX39A-204ENST00000586558 SRPK3Q9UPE1 567 aa18.34■□□□□ 0.53
DDX39A-204ENST00000586558 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-204ENST00000586558 UQCRHLA0A096LP55 91 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 STMND1H3BQB6 276 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 E2F3O00716 465 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 CPNE3O75131 537 aaKnown RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 STK17BO94768 372 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 UQCRHP07919 91 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 RPS17P08708 135 aaKnown RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 HBQ1P09105 142 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 EPORP19235 508 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 CASP2P42575 452 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PRKAA2P54646 552 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PCBP4P57723 403 aaKnown RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 VSX2P58304 361 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 IRF8Q02556 426 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 GTF2H2Q13888 395 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 E2F2Q14209 437 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 GRM7Q14831 915 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PAGE2BQ5JRK9 111 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 YOD1Q5VVQ6 348 aaPredicted RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 FRMPD2BQ6IN97 320 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 GTF2H2CQ6P1K8 395 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 EXOC3L1Q86VI1 746 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 CCDC63Q8NA47 563 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 SNIP1Q8TAD8 396 aaKnown RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 MDM1Q8TC05 714 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PTCD3Q96EY7 689 aaKnown RBP18.33■□□□□ 0.52
DDX39A-204ENST00000586558 SPRY4Q9C004 299 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PCTPQ9UKL6 214 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PCDHGA4Q9Y5G9 962 aa18.33■□□□□ 0.52
DDX39A-204ENST00000586558 PCM1Q15154 2024 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 LOC105369274A0A096LPK9 316 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 LOC102723532A0A0G2JNH3 316 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 FITM1A5D6W6 292 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 LRRC14BA6NHZ5 514 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 G3V2L1 256 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 H0YGG7 62 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 TYROBPO43914 113 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 SPAG7O75391 227 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 DLGAP3O95886 979 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 CAPNS1P04632 268 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 CPA3P15088 417 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 IMPDH1P20839 514 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 GSTM2P28161 218 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 AHRP35869 848 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 BCL6P41182 706 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 EMP3P54852 163 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 ARF3P61204 181 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-204ENST00000586558 NAA20P61599 178 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 LAPTM5Q13571 262 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 MAP7Q14244 749 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 XKR6Q5GH73 641 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 WASHC2DQ5SRD0 308 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 GOLGA7Q7Z5G4 137 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 PLD3Q8IV08 490 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 OR4N4Q8N0Y3 316 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 KRT78Q8N1N4 520 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF655Q8N720 491 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-204ENST00000586558 CSNK1A1LQ8N752 337 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 MFSD9Q8NBP5 474 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 L3HYPDHQ96EM0 354 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 SEC16BQ96JE7 1060 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 NLNQ9BYT8 704 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 SPRTNQ9H040 489 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-204ENST00000586558 NT5DC2Q9H857 520 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 ACTR5Q9H9F9 607 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-204ENST00000586558 TMBIM4Q9HC24 238 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 GEMIN8Q9NWZ8 242 aaKnown RBP18.32■□□□□ 0.52
DDX39A-204ENST00000586558 COPG2Q9UBF2 871 aa18.32■□□□□ 0.52
DDX39A-204ENST00000586558 C1QTNF9BB2RNN3 333 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF749O43361 778 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 OR1F1O43749 312 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 UGDHO60701 494 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 WFS1O76024 890 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 KIAA0754O94854 1291 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 TIAF1O95411 115 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 C1QTNF9P0C862 333 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 SCTRP47872 440 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 ARSFP54793 590 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 CHIT1Q13231 466 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 DOC2AQ14183 400 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 SLBPQ14493 270 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDX39A-204ENST00000586558 PRTGQ2VWP7 1150 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 TTC29Q8NA56 475 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-204ENST00000586558 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 TTLQ8NG68 377 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 TCP10LQ8TDR4 215 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 ZNF483Q8TF39 744 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-204ENST00000586558 UBE2E3Q969T4 207 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 LRFN5Q96NI6 719 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 FAM111AQ96PZ2 611 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 NDC1Q9BTX1 674 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 IPPKQ9H8X2 491 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 IGF2RP11717 2491 aa18.31■□□□□ 0.52
DDX39A-204ENST00000586558 FEZF1A0PJY2 475 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 AGPSO00116 658 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 TM9SF1O15321 606 aa18.3■□□□□ 0.52
DDX39A-204ENST00000586558 EIF2S1P05198 315 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms