RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ITGAXP20702 1163 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC6A12P48065 614 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 VSX2P58304 361 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 CSNK1G2P78368 415 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 RASA2Q15283 850 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 UGT8Q16880 541 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 PTCHD3Q3KNS1 767 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 FBXO42Q6P3S6 717 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 ADGRD1Q6QNK2 874 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 FAM198BQ6UWH4 519 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 FAM20CQ8IXL6 584 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 AIF1LQ9BQI0 150 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 UNKQ9C0B0 810 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SPRTNQ9H040 489 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 WDR54Q9H977 334 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 PSMC3IPQ9P2W1 217 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 TUBD1Q9UJT1 453 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 POLHQ9Y253 713 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 ANKRD12Q6UB98 2062 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 SEC16AO15027 2179 aa13.2□□□□□ -0.3
PRKCSH-202ENST00000585540 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 TRBC2A0A5B9 178 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 HYKKA2RU49 373 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 H0YGG7 62 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 H7BY64 318 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ATXN7O15265 892 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 STK16O75716 305 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 RBP1P09455 135 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 TFEBP19484 476 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 AHRP35869 848 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 HSD17B3P37058 310 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 PIK3CGP48736 1102 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ARF3P61204 181 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 CDC16Q13042 620 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 PWP1Q13610 501 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 MRPL14Q6P1L8 145 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 EMBQ6PCB8 327 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 BORAQ6PGQ7 559 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 MBOAT1Q6ZNC8 495 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ISCA2Q86U28 154 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 THOC6Q86W42 341 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 RAB43Q86YS6 212 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC38A9Q8NBW4 561 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ACMSDQ8TDX5 336 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 PRAP1Q96NZ9 151 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 ACTL8Q9H568 366 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 CLK4Q9HAZ1 481 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 C14orf105Q9NVL8 296 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 CD274Q9NZQ7 290 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 COPG2Q9UBF2 871 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 IL17BQ9UHF5 180 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 KLHL20Q9Y2M5 609 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 TNPO3Q9Y5L0 923 aaKnown RBP13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 DMXL2Q8TDJ6 3036 aa13.19□□□□□ -0.3
PRKCSH-202ENST00000585540 SPTBP11277 2137 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 H0YIG0 161 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 HAT1O14929 419 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 HCRTR1O43613 425 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 KLHL41O60662 606 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 H2AFYO75367 372 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 KATNA1O75449 491 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 WDR47O94967 919 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 REEP5Q00765 189 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 NKAIN1Q4KMZ8 207 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 PAGE2BQ5JRK9 111 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 FRMPD2BQ6IN97 320 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 TTLL10Q6ZVT0 673 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 ASPGQ86U10 573 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 TDRPQ86YL5 185 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 SPATA6LQ8N4H0 392 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 ENDOVQ8N8Q3 282 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 MFSD9Q8NBP5 474 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 TRPV3Q8NET8 790 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 TTC9Q92623 222 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 CAVIN3Q969G5 261 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 PTERQ96BW5 349 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 EFCAB11Q9BUY7 163 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 NT5DC2Q9H857 520 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 DNAJC11Q9NVH1 559 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 DHCR7Q9UBM7 475 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 PTBP2Q9UKA9 531 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 RUVBL1Q9Y265 456 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 SLC22A14Q9Y267 594 aa13.18□□□□□ -0.3
PRKCSH-202ENST00000585540 MDC1Q14676 2089 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 CLGNO14967 610 aa13.17□□□□□ -0.3
PRKCSH-202ENST00000585540 CAPN1P07384 714 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms