RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
SDF2-202ENST00000585428 TAC3Q9UHF0 121 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ZNF835Q9Y2P0 537 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
SDF2-202ENST00000585428 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 H0YIG0 161 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 GOLGA8TH3BQL2 631 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 GFYI3L273 518 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 P2RX6O15547 441 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 C8orf89P0DMQ9 161 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 AGAP20933 346 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 MGAT1P26572 445 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 CLCN7P51798 805 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
SDF2-202ENST00000585428 KCNJ11Q14654 390 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
SDF2-202ENST00000585428 RNF187Q5TA31 235 aaPredicted RBP13.69□□□□□ -0.22
SDF2-202ENST00000585428 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 RPTNQ6XPR3 784 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 CYHR1Q6ZMK1 362 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 NEK10Q6ZWH5 1172 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 CENPUQ71F23 418 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
SDF2-202ENST00000585428 REXO1L1PQ8IX06 675 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 ZNF295-AS1Q8N0V1 137 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 FAM136AQ96C01 138 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 FAM114A2Q9NRY5 505 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 TEKT2Q9UIF3 430 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
SDF2-202ENST00000585428 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 DCHS2Q6V1P9 2916 aa13.69□□□□□ -0.22
SDF2-202ENST00000585428 TEP1Q99973 2627 aaKnown RBP13.68□□□□□ -0.22
SDF2-202ENST00000585428 ZNF839A8K0R7 811 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 H7BY64 318 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 HAT1O14929 419 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 PFDN6O15212 129 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 CCNDBP1O95273 360 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 CATP04040 527 aaKnown RBP13.68□□□□□ -0.22
SDF2-202ENST00000585428 CYC1P08574 325 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 CDK16Q00536 496 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 RBPJQ06330 500 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 NDUFA9Q16795 377 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 CILP2Q8IUL8 1156 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 PPFIBP2Q8ND30 876 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 THAP3Q8WTV1 239 aaPredicted RBP13.68□□□□□ -0.22
SDF2-202ENST00000585428 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 PRAP1Q96NZ9 151 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
SDF2-202ENST00000585428 SYBUQ9NX95 663 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 KLHL42Q9P2K6 505 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 MED16Q9Y2X0 877 aa13.68□□□□□ -0.22
SDF2-202ENST00000585428 IGHV3-20A0A0C4DH32 117 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 TCRBV7S3A2A0A539 114 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 A8MUI8 341 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 SLC19A2O60779 497 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 NSA2O95478 260 aaKnown RBP13.67□□□□□ -0.22
SDF2-202ENST00000585428 OGNP20774 298 aaKnown RBP13.67□□□□□ -0.22
SDF2-202ENST00000585428 CD96P40200 585 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
SDF2-202ENST00000585428 AVPR1BP47901 424 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 BASP1P80723 227 aaKnown RBP13.67□□□□□ -0.22
SDF2-202ENST00000585428 ADORA2A-AS1P86434 159 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 ZNF33BQ06732 778 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 LONRF1Q17RB8 773 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 KRTCAP3Q53RY4 240 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 ZNF766Q5HY98 468 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 MEI1Q5TIA1 1274 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 ARMC3Q5W041 872 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
SDF2-202ENST00000585428 GDF7Q7Z4P5 450 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 PCGF5Q86SE9 256 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 PLD3Q8IV08 490 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 MDS2Q8NDY4 140 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 OR9A4Q8NGU2 314 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 TM4SF19Q96DZ7 209 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 TRIM8Q9BZR9 551 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 TMEM184CQ9NVA4 438 aa13.67□□□□□ -0.22
SDF2-202ENST00000585428 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 OR2W5A6NFC9 320 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SMAPO00193 183 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 AVILO75366 819 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 SEC24DO94855 1032 aaPredicted RBP13.66□□□□□ -0.22
SDF2-202ENST00000585428 HRH2P25021 359 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 PMP22Q01453 160 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 TSTA3Q13630 321 aaPredicted RBP13.66□□□□□ -0.22
SDF2-202ENST00000585428 TUBA3CQ13748 450 aa13.66□□□□□ -0.22
SDF2-202ENST00000585428 PTK6Q13882 451 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms