RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ACACAQ13085 2346 aa2.47□□□□□ -2.01
VAPA-208ENST00000584796 F5P12259 2224 aa2.46□□□□□ -2.01
VAPA-208ENST00000584796 CEP192Q8TEP8 1941 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 DOPEY2Q9Y3R5 2298 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 A0A1W2PPH5 198 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PGPEP1LA6NFU8 196 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 USO1O60763 962 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 TMEM63AO94886 807 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ACTN1P12814 892 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 CEBPBP17676 345 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ALOX12P18054 663 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 EPHA2P29317 976 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 TLX1P31314 330 aaPredicted RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 RFC2P35250 354 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PI4KAP42356 2102 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 KRT83P78385 493 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 GSTO1P78417 241 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 KCNJ10P78508 379 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ARHGAP1Q07960 439 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 GALNT2Q10471 571 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 KCNC3Q14003 757 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 KRT32Q14532 448 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 GPR68Q15743 365 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 BAK1Q16611 211 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PTGISQ16647 500 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 GTDC1Q4AE62 458 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 CFAP58Q5T655 872 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ALS2CLQ60I27 953 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 FAM205BPQ63HN1 556 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PWWP2BQ6NUJ5 590 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ENOSF1Q7L5Y1 443 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 CREBRFQ8IUR6 639 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 OR6J1Q8NGC5 347 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ATP8B4Q8TF62 1192 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PSPC1Q8WXF1 523 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 GTF3C6Q969F1 213 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 RRP36Q96EU6 259 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 SLC47A1Q96FL8 570 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 TMEM68Q96MH6 324 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ZNF300Q96RE9 604 aaPredicted RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 PKP2Q99959 881 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 SLF1Q9BQI6 1058 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 RHNO1Q9BSD3 238 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 MTG1Q9BT17 334 aaPredicted RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 TEX13BQ9BXU2 312 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 UPF3BQ9BZI7 483 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 SLC38A10Q9HBR0 1119 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 PRR34Q9NV39 138 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 FAM120CQ9NX05 1096 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 TBX20Q9UMR3 447 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 TMEM184BQ9Y519 407 aaPredicted RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 CSAG2Q9Y5P2 127 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 CAPN7Q9Y6W3 813 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 MYH9P35579 1960 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 TRIP11Q15643 1979 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 VWA8A3KMH1 1905 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 TDRD15B5MCY1 1934 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 HELZP42694 1942 aaKnown RBP2.46□□□□□ -2.02
VAPA-208ENST00000584796 SPTA1P02549 2419 aa2.46□□□□□ -2.02
VAPA-208ENST00000584796 ITPR3Q14573 2671 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 PCNX2A6NKB5 2137 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 ABCA7Q8IZY2 2146 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 UBR5O95071 2799 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 COL5A1P20908 1838 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 PTPRQQ9UMZ3 2332 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 A0A087WW49 117 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 SYNDIG1LA6NDD5 238 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 EIF4E1BA6NMX2 242 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 C15orf62A8K5M9 175 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 HIDE1A8MVS5 230 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 PLOD2O00469 737 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 N4BP1O75113 896 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 PRDM1O75626 825 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 IDH1O75874 414 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 CABYRO75952 493 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 RTN3O95197 1032 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 MMP1P03956 469 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 DCNP07585 359 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 HNRNPA1P09651 372 aaKnown RBP eCLIP2.45□□□□□ -2.021e-6■■□□□ 11.6
VAPA-208ENST00000584796 SP9P0CG40 484 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 IL7RP16871 459 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 ANXA7P20073 488 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 CHMP24386 653 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 PBX3P40426 434 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 MMP15P51511 669 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 CTSCP53634 463 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 CASP6P55212 293 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 SNX16P57768 344 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 ARF3P61204 181 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 ARF1P84077 181 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 RIGQ13278 110 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 DCTN2Q13561 401 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 MVPQ14764 893 aaKnown RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 DUSP28Q4G0W2 176 aa2.45□□□□□ -2.02
VAPA-208ENST00000584796 CCDC92Q53HC0 331 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 SOWAHCQ53LP3 525 aaPredicted RBP2.45□□□□□ -2.02
VAPA-208ENST00000584796 ZNF805Q5CZA5 627 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms