RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 BARD1Q99728 777 aaKnown RBP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 AARSD1Q9BTE6 412 aaKnown RBP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 PHACTR1Q9C0D0 580 aa19.92■□□□□ 0.78
CCDC42-203ENST00000581598 LHPPQ9H008 270 aa19.92■□□□□ 0.78
CCDC42-203ENST00000581598 ILKAPQ9H0C8 392 aaPredicted RBP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 ZBTB20Q9HC78 741 aaPredicted RBP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 RUVBL1Q9Y265 456 aaKnown RBP19.92■□□□□ 0.78
CCDC42-203ENST00000581598 ICE1Q9Y2F5 2266 aa19.92■□□□□ 0.78
CCDC42-203ENST00000581598 A0A1W2PQ72 361 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 HAUS5O94927 633 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 AGFG2O95081 481 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 HPP00738 406 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 F7P08709 466 aaPredicted RBP19.91■□□□□ 0.78
CCDC42-203ENST00000581598 PGAM1P18669 254 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 FBLP22087 321 aaKnown RBP19.91■□□□□ 0.78
CCDC42-203ENST00000581598 DSG2Q14126 1118 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 HSP90AA5PQ58FG0 334 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 AGAP7PQ5VUJ5 663 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 IRAK1BP1Q5VVH5 260 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 ATG9BQ674R7 924 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 UGT3A1Q6NUS8 523 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 SHISA6Q6ZSJ9 500 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 KCNMB4Q86W47 210 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 PPFIBP2Q8ND30 876 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 GABPB2Q8TAK5 448 aaPredicted RBP19.91■□□□□ 0.78
CCDC42-203ENST00000581598 CABS1Q96KC9 395 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 AGAP4Q96P64 663 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 EBNA1BP2Q99848 306 aaKnown RBP19.91■□□□□ 0.78
CCDC42-203ENST00000581598 WDR77Q9BQA1 342 aaPredicted RBP19.91■□□□□ 0.78
CCDC42-203ENST00000581598 SYNPO2LQ9H987 977 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 C14orf105Q9NVL8 296 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 NFU1Q9UMS0 254 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 PCDHGA10Q9Y5H3 936 aa19.91■□□□□ 0.78
CCDC42-203ENST00000581598 E7ESA3 106 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 PCDH17O14917 1159 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 TTC4O95801 387 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 MYBL2P10244 700 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 HRH2P25021 359 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 IMPA1P29218 277 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 SLC26A3P40879 764 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 MPP1Q00013 466 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 TSTA3Q13630 321 aaPredicted RBP19.9■□□□□ 0.78
CCDC42-203ENST00000581598 CRYMQ14894 314 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 CPNE9Q8IYJ1 553 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 C2CD4AQ8NCU7 369 aaPredicted RBP19.9■□□□□ 0.78
CCDC42-203ENST00000581598 RERGQ96A58 199 aaPredicted RBP19.9■□□□□ 0.78
CCDC42-203ENST00000581598 C19orf60Q96EN9 201 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 FMO2Q99518 471 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 NAT9Q9BTE0 207 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 TGIF2Q9GZN2 237 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 LRRC4CQ9HCJ2 640 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 ASF1BQ9NVP2 202 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 MTRF1LQ9UGC7 380 aaKnown RBP19.9■□□□□ 0.78
CCDC42-203ENST00000581598 C3orf18Q9UK00 162 aa19.9■□□□□ 0.78
CCDC42-203ENST00000581598 MAP2K7O14733 419 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 ALOX12BO75342 701 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 SYF2O95926 243 aaKnown RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 ACPPP15309 386 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 ARL4CP56559 192 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 FAM53BQ14153 422 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 HIF1AQ16665 826 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 HKDC1Q2TB90 917 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 VWA2Q5GFL6 755 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 UBE2R2Q712K3 238 aaPredicted RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 PIWIL4Q7Z3Z4 852 aaKnown RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 CUZD1Q86UP6 607 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 CISD2Q8N5K1 135 aaKnown RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 SSC4DQ8WTU2 575 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 PWWP2AQ96N64 755 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 MKKSQ9NPJ1 570 aaPredicted RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 IARS2Q9NSE4 1012 aaKnown RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 STOX2Q9P2F5 926 aaPredicted RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 MAP10Q9P2G4 905 aa19.89■□□□□ 0.77
CCDC42-203ENST00000581598 PRRC2CQ9Y520 2896 aaKnown RBP19.89■□□□□ 0.77
CCDC42-203ENST00000581598 EIF3HO15372 352 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC42-203ENST00000581598 CBX6O95503 412 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 TIAL1Q01085 375 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC42-203ENST00000581598 Q0VFX4 171 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 MRPL49Q13405 166 aaKnown RBP19.88■□□□□ 0.77
CCDC42-203ENST00000581598 SPANXN3Q5MJ09 141 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 KIAA0408Q6ZU52 694 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 GALNT7Q86SF2 657 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 CNTN4Q8IWV2 1026 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 PARP9Q8IXQ6 854 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 PDIK1LQ8N165 341 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 AMER3Q8N944 861 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 CCDC138Q96M89 665 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 LMF1Q96S06 567 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 PCBD2Q9H0N5 130 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 TSPYL1Q9H0U9 437 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 EPS8L2Q9H6S3 715 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 TMEM184CQ9NVA4 438 aa19.88■□□□□ 0.77
CCDC42-203ENST00000581598 TRMT6Q9UJA5 497 aaKnown RBP19.88■□□□□ 0.77
CCDC42-203ENST00000581598 KCNE1BA0A087WTH5 132 aa19.87■□□□□ 0.77
CCDC42-203ENST00000581598 HAT1O14929 419 aa19.87■□□□□ 0.77
CCDC42-203ENST00000581598 FOXS1O43638 330 aa19.87■□□□□ 0.77
CCDC42-203ENST00000581598 SEMA7AO75326 666 aa19.87■□□□□ 0.77
CCDC42-203ENST00000581598 DDAH2O95865 285 aa19.87■□□□□ 0.77
CCDC42-203ENST00000581598 C8GP07360 202 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms