RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 SDC1P18827 310 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 XRCC1P18887 633 aaPredicted RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 MAGP20916 626 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CALB2P22676 271 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 AVPR2P30518 371 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HNRNPH1P31943 449 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SHMT2P34897 504 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ATP4BP51164 291 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CCR8P51685 355 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 AFF3P51826 1226 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GFERP55789 205 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ERVK-8P63133 956 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PHC1P78364 1004 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HHEXQ03014 270 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 EMX2Q04743 252 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PRDX1Q06830 199 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GRIK2Q13002 908 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CYLC2Q14093 348 aaPredicted RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CAPRIN1Q14444 709 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HERC3Q15034 1050 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ANGPT1Q15389 498 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DEFB110Q30KQ9 67 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 GTDC1Q4AE62 458 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TIGD2Q4W5G0 525 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PDCD4Q53EL6 469 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PAGE3Q5JUK9 113 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 METTL21CQ5VZV1 264 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FCRL6Q6DN72 434 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLC2A7Q6PXP3 512 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TMEM26Q6ZUK4 368 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KANSL1Q7Z3B3 1105 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 VN1R4Q7Z5H5 301 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SPATA19Q7Z5L4 167 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PAQR7Q86WK9 346 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DCP2Q8IU60 420 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SLC35F3Q8IY50 421 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LAS2Q8IYD9 372 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 MIER2Q8N344 545 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DTWD1Q8N5C7 304 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 Q8N9G6 341 aaPredicted RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ABHD11Q8NFV4 315 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CREB3L4Q8TEY5 395 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SETD7Q8WTS6 366 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 UCN3Q969E3 161 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 KLHL29Q96CT2 875 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 CMTM7Q96FZ5 175 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 FCRL1Q96LA6 429 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PPP3R2Q96LZ3 170 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 HAUS8Q9BT25 410 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 EFCAB11Q9BUY7 163 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 BRINP2Q9C0B6 783 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 TWSG1Q9GZX9 223 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 LHX9Q9NQ69 397 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SDR39U1Q9NRG7 319 aaPredicted RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 POT1Q9NUX5 634 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 C1orf109Q9NX04 203 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 SPASTQ9UBP0 616 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 DOLKQ9UPQ8 538 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 MRPS2Q9Y399 296 aaKnown RBP5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 PCDHB11Q9Y5F2 797 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 RNF215Q9Y6U7 377 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 COLEC10Q9Y6Z7 277 aa5.9□□□□□ -1.46
RNU4ATAC-201ENST00000580972 ATG2BQ96BY7 2078 aa5.9□□□□□ -1.47
RNU4ATAC-201ENST00000580972 LOC105369274A0A096LPK9 316 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 LY6G6EA0A0G2JKS1 128 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 KIR2DS5A0A0G2JLQ3 304 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 A0A0G2JNG1 304 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 LOC102723532A0A0G2JNH3 316 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 ZNF839A8K0R7 811 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 WASHC1A8K0Z3 465 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 LMO7DNF2Z398 122 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 KIR2DS3K7RE56 304 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 MRASO14807 208 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 CFLARO15519 480 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 UGDHO60701 494 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 DNAJB6O75190 326 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 PRKRAO75569 313 aaKnown RBP5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 C9P02748 559 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 ATXN8OSP0DMR3 200 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 IDO1P14902 403 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 NDUFS1P28331 727 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 PTPN4P29074 926 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 EPHA8P29322 1005 aaPredicted RBP5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 PRDX6P30041 224 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 CMPK1P30085 196 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 HSD17B2P37059 387 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 NUDT2P50583 147 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 BLKP51451 505 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 OR1D5P58170 312 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 STX1BP61266 288 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 HNRNPKP61978 463 aaKnown RBP eCLIP5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 MXRA7P84157 204 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 MC1RQ01726 317 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 CFHR1Q03591 330 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 HYAL2Q12891 473 aa5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 CSTF3Q12996 717 aaKnown RBP5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 SIM2Q14190 667 aaPredicted RBP5.89□□□□□ -1.47
RNU4ATAC-201ENST00000580972 SELPLGQ14242 412 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms