RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 SYT16Q17RD7 645 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 AGAP7PQ5VUJ5 663 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 IRAK1BP1Q5VVH5 260 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 KIAA0408Q6ZU52 694 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 CUZD1Q86UP6 607 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 PALM2Q8IXS6 379 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 PDIK1LQ8N165 341 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 MYO1HQ8N1T3 1032 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 CFAP36Q96G28 342 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 AGAP4Q96P64 663 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 PSMG3-AS1Q96PY0 264 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 WDR83Q9BRX9 315 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 ZNF160Q9HCG1 818 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 CHMP2BQ9UQN3 213 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 SH2B3Q9UQQ2 575 aa20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 MRPS2Q9Y399 296 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-215ENST00000580784 ICE1Q9Y2F5 2266 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 BLACEA4D250 179 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 IDSB3KWA1 339 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 PRPF4O43172 522 aaKnown RBP eCLIP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 HPP00738 406 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 GLRBP48167 497 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 EMP2P54851 167 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 DR1Q01658 176 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 PHKG1Q16816 387 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 EIF2S3LQ2VIR3 472 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 CRB2Q5IJ48 1285 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 FHL5Q5TD97 284 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 HIBCHQ6NVY1 386 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 TRMT10BQ6PF06 316 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 AGTRAPQ6RW13 159 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 IGFL2Q6UWQ7 119 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 SYDE1Q6ZW31 735 aaPredicted RBP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 ALKBH8Q96BT7 664 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 LINGO1Q96FE5 620 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 MACROD1Q9BQ69 325 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 TRIM51Q9BSJ1 452 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 DRC3Q9H069 523 aa20.22■□□□□ 0.83
CSNK1D-215ENST00000580784 MAP2K7O14733 419 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 SLC16A5O15375 505 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 SEMA7AO75326 666 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 AGFG2O95081 481 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 TSPAN12O95859 305 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 ANXA5P08758 320 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 HRH2P25021 359 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 CSNK1G2P78368 415 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 MAT1AQ00266 395 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 SP140Q13342 867 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 NAE1Q13564 534 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 FAM53BQ14153 422 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 FAAH2Q6GMR7 532 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 VN1R4Q7Z5H5 301 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 GALNT7Q86SF2 657 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 WDR77Q9BQA1 342 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 SLC29A3Q9BZD2 475 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 TGIF2Q9GZN2 237 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 PCBD2Q9H0N5 130 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 MKKSQ9NPJ1 570 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 SAR1BQ9Y6B6 198 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 TEX264Q9Y6I9 313 aa20.21■□□□□ 0.83
CSNK1D-215ENST00000580784 KCNE1BA0A087WTH5 132 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 TTI1O43156 1089 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 KLHL18O94889 574 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 HEXBP07686 556 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 CXCR2P25025 360 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 ITGA8P53708 1063 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 IL2P60568 153 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 RPS15AP62244 130 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 PDAP1Q13442 181 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 NDUFA9Q16795 377 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 ZXDCQ2QGD7 858 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 HECTD2Q5U5R9 776 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 LINC00696Q6ZRV3 163 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 NDUFAF7Q7L592 441 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 GPATCH11Q8N954 259 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 OR9A4Q8NGU2 314 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 PRR7Q8TB68 274 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 DNAJB14Q8TBM8 379 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 RUNDC3BQ96NL0 473 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 NAPGQ99747 312 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 LRRC4CQ9HCJ2 640 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 C14orf105Q9NVL8 296 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 NTNG1Q9Y2I2 539 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 VWA7Q9Y334 891 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 PCDHGA10Q9Y5H3 936 aa20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 COPG1Q9Y678 874 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-215ENST00000580784 NSG1A0A0A6YYJ2 146 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 FEZF1A0PJY2 475 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 CBX6O95503 412 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 HIST1H2AGP0C0S8 130 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 COX6A1P12074 109 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 NPPBP16860 134 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 HIST1H2ADP20671 130 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 AVPR1BP47901 424 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 EEF1A2Q05639 463 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 NR6A1Q15406 480 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 STEAP4Q687X5 459 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 PRSS41Q7RTY9 318 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 C17orf64Q86WR6 236 aa20.19■□□□□ 0.82
CSNK1D-215ENST00000580784 ANKMY2Q8IV38 441 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms