RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 SARGQ9BW04 601 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 C1QTNF3Q9BXJ4 246 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 ERVK-6Q9BXR3 956 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 SLC7A5P2Q9GIP4 190 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 PITHD1Q9GZP4 211 aaPredicted RBP14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 SPRTNQ9H040 489 aaPredicted RBP14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 CCDC86Q9H6F5 360 aaKnown RBP14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 IPPKQ9H8X2 491 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 ASCL3Q9NQ33 180 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 SLC17A7Q9P2U7 560 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 COPG2Q9UBF2 871 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 AP1M2Q9Y6Q5 423 aa14.9□□□□□ -0.02
SLC6A4-205ENST00000579221 LOC105369274A0A096LPK9 316 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 LOC102723532A0A0G2JNH3 316 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 OR1F1O43749 312 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 LCMT2O60294 686 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 NRP2O60462 931 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 SCRG1O75711 98 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 SUPT7LO94864 414 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 EIF2S1P05198 315 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 HBQ1P09105 142 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 VARSP26640 1264 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 DNAJB13P59910 316 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 NAA20P61599 178 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 MEF2AQ02078 507 aaPredicted RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 ASPHQ12797 758 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 DOC2AQ14183 400 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 RBBP5Q15291 538 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 TBCCQ15814 346 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 PAGE2BQ5JRK9 111 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 WASHC2DQ5SRD0 308 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 FRMPD2BQ6IN97 320 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 PWWP2BQ6NUJ5 590 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 PLD3Q8IV08 490 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 OR4N4Q8N0Y3 316 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 TTC29Q8NA56 475 aaPredicted RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 MFSD9Q8NBP5 474 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 GATA6Q92908 595 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 L3HYPDHQ96EM0 354 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 WDR34Q96EX3 536 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 ZNF285Q96NJ3 590 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 EFCAB11Q9BUY7 163 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 NLNQ9BYT8 704 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 NT5DC2Q9H857 520 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 NOL11Q9H8H0 719 aaKnown RBP14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 OXSMQ9NWU1 459 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 PCTPQ9UKL6 214 aa14.89□□□□□ -0.03
SLC6A4-205ENST00000579221 TM9SF1O15321 606 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 PRPF4O43172 522 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 WFS1O76024 890 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 RPS17P08708 135 aaKnown RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 EPORP19235 508 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 BCL6P41182 706 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 CCNG1P51959 295 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ARSFP54793 590 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 MAGOHP61326 146 aaKnown RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 REEP5Q00765 189 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 CLCQ05315 142 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 SLBPQ14493 270 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 GRM7Q14831 915 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 FAM214AQ32MH5 1076 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 TBC1D25Q3MII6 688 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 LIPMQ5VYY2 423 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 LIPJQ5W064 366 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ZNF655Q8N720 491 aaPredicted RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 CAMKVQ8NCB2 501 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ZNF483Q8TF39 744 aaPredicted RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 SREK1Q8WXA9 508 aaKnown RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 FGF11Q92914 225 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 UBE2E3Q969T4 207 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 PMEPA1Q969W9 287 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 CLIP3Q96DZ5 547 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 NDC1Q9BTX1 674 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ULBP3Q9BZM4 244 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ACTR8Q9H981 624 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 ENAMQ9NRM1 1142 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 GEMIN8Q9NWZ8 242 aaKnown RBP14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 FOXJ2Q9P0K8 574 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 DKK4Q9UBT3 224 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 PCDHB3Q9Y5E6 796 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 PCDHGA4Q9Y5G9 962 aa14.88□□□□□ -0.03
SLC6A4-205ENST00000579221 H3BMH7 237 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 ZSCAN9O15535 394 aaPredicted RBP14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 ZNF749O43361 778 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 UGDHO60701 494 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 PRAMEF4O60810 478 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 TRIM13O60858 407 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 STK17BO94768 372 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 KIAA0754O94854 1291 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 ZWINTO95229 277 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 MLYCDO95822 493 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 NTRK1P04629 796 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 AHRP35869 848 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 ARL1P40616 181 aaPredicted RBP14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 HNF4AP41235 474 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 SCTRP47872 440 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 NAGLUP54802 743 aa14.87□□□□□ -0.03
SLC6A4-205ENST00000579221 CDH13P55290 713 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms