RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PIAS1O75925 651 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 CTSBP07858 339 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 PSMB5P28074 263 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 GP5P40197 560 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 GRIA3P42263 894 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 GABRA4P48169 554 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 POU4F1Q01851 419 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 TAP2Q03519 686 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 ELOAQ14241 798 aaKnown RBP15.3■□□□□ 0.04
VAPA-204ENST00000577901 SLC9A5Q14940 896 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 CRB2Q5IJ48 1285 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 GRTP1Q5TC63 336 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 FCRL6Q6DN72 434 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 TLDC1Q6P9B6 456 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 PPP1R32Q7Z5V6 425 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 MCATQ8IVS2 390 aaKnown RBP15.3■□□□□ 0.04
VAPA-204ENST00000577901 ZADH2Q8N4Q0 377 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 NKAPQ8N5F7 415 aaKnown RBP15.3■□□□□ 0.04
VAPA-204ENST00000577901 FBF1Q8TES7 1133 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 PTERQ96BW5 349 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 TSPAN17Q96FV3 270 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 ACAT2Q9BWD1 397 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 POPDC3Q9HBV1 291 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 EURLQ9NYK6 297 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 DHCR7Q9UBM7 475 aaKnown RBP15.3■□□□□ 0.04
VAPA-204ENST00000577901 ADAMTS6Q9UKP5 1117 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 SRPK3Q9UPE1 567 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 PDE10AQ9Y233 779 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 KLK4Q9Y5K2 254 aa15.3■□□□□ 0.04
VAPA-204ENST00000577901 MASP2O00187 686 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 SRPX2O60687 465 aaPredicted RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 CNOT3O75175 753 aaKnown RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 TSPAN12O95859 305 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 UMODP07911 640 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ZNF37AP17032 561 aaPredicted RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 PHBP35232 272 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 SPRP35270 261 aaPredicted RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 GLRBP48167 497 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 SOX8P57073 446 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 FOXL2P58012 376 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 TAS2R39P59534 338 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ABATP80404 500 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 PRDX1Q06830 199 aaKnown RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 KBTBD12Q3ZCT8 623 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 NKAIN1Q4KMZ8 207 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 THEMIS2Q5TEJ8 643 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 MRPL14Q6P1L8 145 aaKnown RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 Q6ZS92 163 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ZNF655Q8N720 491 aaPredicted RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 PPM1NQ8N819 430 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 PPFIBP2Q8ND30 876 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ANKRD7Q92527 254 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 DLG3Q92796 817 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 RBBP8Q99708 897 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 MCMBPQ9BTE3 642 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 NDC1Q9BTX1 674 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ZBTB20Q9HC78 741 aaPredicted RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 GPAMQ9HCL2 828 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 MRPS30Q9NP92 439 aaKnown RBP15.29■□□□□ 0.04
VAPA-204ENST00000577901 ATP13A2Q9NQ11 1180 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 ABCF3Q9NUQ8 709 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 TAC3Q9UHF0 121 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 NTNG1Q9Y2I2 539 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 PCDHGA10Q9Y5H3 936 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 SPTBP11277 2137 aa15.29■□□□□ 0.04
VAPA-204ENST00000577901 DOPEY1Q5JWR5 2465 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 ENO2P09104 434 aaPredicted RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 IMPA1P29218 277 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 PGGT1BP53609 377 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 AP1S2P56377 157 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 NAB1Q13506 487 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 USP10Q14694 798 aaKnown RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 TCTE1Q5JU00 501 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 ICE2Q659A1 982 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 TMEM207Q6UWW9 146 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 CUZD1Q86UP6 607 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 TMEM151BQ8IW70 566 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 IFT20Q8IY31 132 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 FMO2Q99518 471 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 BARD1Q99728 777 aaKnown RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 DPH7Q9BTV6 452 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 PCBD2Q9H0N5 130 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 CCDC177Q9NQR7 707 aaPredicted RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 ARL15Q9NXU5 204 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 STOX2Q9P2F5 926 aaPredicted RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 MTO1Q9Y2Z2 717 aaKnown RBP15.28■□□□□ 0.04
VAPA-204ENST00000577901 LRBAP50851 2863 aa15.28■□□□□ 0.04
VAPA-204ENST00000577901 AGPSO00116 658 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 C1QAP02745 245 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 STMN1P16949 149 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 CCND1P24385 295 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 ARSFP54793 590 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 AIMP2Q13155 320 aaKnown RBP15.27■□□□□ 0.04
VAPA-204ENST00000577901 AGTRAPQ6RW13 159 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 CEP97Q8IW35 865 aa15.27■□□□□ 0.04
VAPA-204ENST00000577901 LRRC56Q8IYG6 542 aaPredicted RBP15.27■□□□□ 0.04
VAPA-204ENST00000577901 ATL1Q8WXF7 558 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms