RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRBC1P01850 177 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 URODP06132 367 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 UGT2B4P06133 528 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 HNRNPCP07910 306 aaKnown RBP eCLIP5.2□□□□□ -1.58
VAPA-203ENST00000577539 SRFP11831 508 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CYP4B1P13584 511 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SERPINA4P29622 427 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SPAM1P38567 509 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ZFP36L2P47974 494 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 BNIP3Q12983 259 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MAD2L1Q13257 205 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 C5orf22Q49AR2 442 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SULT1C3Q6IMI6 304 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SLC8B1Q6J4K2 584 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 C16orf87Q6PH81 154 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 UBE2R2Q712K3 238 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 THAP5Q7Z6K1 395 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ITIH5Q86UX2 942 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 KIF18BQ86Y91 864 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 NXPE1Q8N323 547 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PARP8Q8N3A8 854 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 FAM26EQ8N5C1 309 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PIH1D2Q8WWB5 315 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MRPS31Q92665 395 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 ZNF583Q96ND8 569 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SH3GL1Q99961 368 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MENTQ9BUN1 341 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 NPLQ9BXD5 320 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 P2RY12Q9H244 342 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TOR3AQ9H497 397 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 IKZF5Q9H5V7 419 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ZDHHC6Q9H6R6 413 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ELAC1Q9H777 363 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 H2AFY2Q9P0M6 372 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 HSFX1Q9UBD0 423 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PTBP2Q9UKA9 531 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 UTS2RQ9UKP6 389 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CLEC3AO75596 197 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 FKBP9O95302 570 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CLDN9O95484 217 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 GLUD1P00367 558 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TFPTP0C1Z6 253 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PSMA3P25788 255 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SHMT2P34897 504 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ALDH3A2P51648 485 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 BPIFB3P59826 476 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 RPS14P62263 151 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 PHEXP78562 749 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 IL5RAQ01344 420 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MEP1AQ16819 746 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TCTN1Q2MV58 587 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 FGD3Q5JSP0 725 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 BROXQ5VW32 411 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ANGPTL8Q6UXH0 198 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 FKBP9P1Q75LS8 142 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MAMDC2Q7Z304 686 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 GPR180Q86V85 440 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 LSMEM1Q8N8F7 131 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 DCAF4L2Q8NA75 395 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PNPT1Q8TCS8 783 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 IGSF21Q96ID5 467 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 BBS2Q9BXC9 721 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 EBPLQ9BY08 206 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 OSBPL6Q9BZF3 934 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 C1orf109Q9NX04 203 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 HECAQ9UBI9 543 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 CLEC4EQ9ULY5 219 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 C16orf96A6NNT2 1141 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 EVPLLA8MZ36 301 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DIRAS1O95057 198 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ZBTB11O95625 1053 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 SERPINA1P01009 418 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BCKDHAP12694 445 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ZNF182P17025 639 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 GGT1P19440 569 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GSSP48637 474 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 PPM1FP49593 454 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 POM121L1PQ3SYA9 428 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SPATS1Q496A3 300 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LDLRAP1Q5SW96 308 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TTC23Q5W5X9 447 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 LRRC66Q68CR7 880 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GRAMD4Q6IC98 578 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SUSD1Q6UWL2 747 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 ZNF621Q6ZSS3 439 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GALNT10Q86SR1 603 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 BBS7Q8IWZ6 715 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DMRTC2Q8IXT2 367 aaPredicted RBP5.19□□□□□ -1.58
VAPA-203ENST00000577539 MICU2Q8IYU8 434 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 CMTM8Q8IZV2 173 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 EID3Q8N140 333 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 DPP10Q8N608 796 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SGCDQ92629 289 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 GTF2H4Q92759 462 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 SH3KBP1Q96B97 665 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 RHBDF1Q96CC6 855 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 TMEM175Q9BSA9 504 aa5.19□□□□□ -1.58
VAPA-203ENST00000577539 HIPK3Q9H422 1215 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms