RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ACTN3Q08043 901 aaPredicted RBP15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 EXT1Q16394 746 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 GARNL3Q5VVW2 1013 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 TMEM198Q66K66 360 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 ANKRD37Q7Z713 158 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 RHOT2Q8IXI1 618 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 ZZZ3Q8IYH5 903 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 RCOR2Q8IZ40 523 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 M1APQ8TC57 530 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 RERGQ96A58 199 aaPredicted RBP15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 RMND5BQ96G75 393 aaPredicted RBP15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 SEC16BQ96JE7 1060 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 FAM118BQ9BPY3 351 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 BPIFA3Q9BQP9 254 aa15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 RUVBL2Q9Y230 463 aaKnown RBP15.33■□□□□ 0.04
CTDNEP1-211ENST00000575783 APOC4-APOC2K7ER74 178 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 NDC80O14777 642 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 AKR1B10O60218 316 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 KLK8O60259 260 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 PRMT3O60678 531 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 PDE9AO76083 593 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 C1orf105O95561 183 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 APOC2P02655 101 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 GYPCP04921 128 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 ADSLP30566 484 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 AVPR1BP47901 424 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 TSTA3Q13630 321 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR9A4Q8NGU2 314 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 HMGCLL1Q8TB92 370 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 SPATA13Q96N96 652 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 PPP1R2P1Q96PQ5 205 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 ALPK1Q96QP1 1244 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 PLCD4Q9BRC7 762 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 GPATCH1Q9BRR8 931 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 CARD6Q9BX69 1037 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 CLEC4MQ9H2X3 399 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 TP63Q9H3D4 680 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 MRPS30Q9NP92 439 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 MMP25Q9NPA2 562 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 EDARQ9UNE0 448 aa15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 INTS1Q8N201 2190 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-211ENST00000575783 MROH6A6NGR9 719 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 KIAA1324LA8MWY0 1029 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 PSTPIP1O43586 416 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 HS6ST1O60243 411 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 STATHP02808 62 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 AOAHP28039 575 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 NUP107P57740 925 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 TAS2R50P59544 299 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 SNRPNP63162 240 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 SNTB1Q13884 538 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 NAA25Q14CX7 972 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 TMED2Q15363 201 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 SUSD1Q6UWL2 747 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 CLEC9AQ6UXN8 241 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 PRIMA1Q86XR5 153 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 CDKL3Q8IVW4 592 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 ARHGEF39Q8N4T4 335 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 WFDC11Q8NEX6 87 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR10Q1Q8NGQ4 319 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 ACTL9Q8TC94 416 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR2A5Q96R48 311 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 GTF3C1Q12789 2109 aa15.31■□□□□ 0.04
CTDNEP1-211ENST00000575783 NSD1Q96L73 2696 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 TXNDC9O14530 226 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 PHF2O75151 1096 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 GOT2P00505 430 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 RBP3P10745 1247 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 TFEBP19484 476 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 CTNNA2P26232 953 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 RPA3P35244 121 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 XCR1P46094 333 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 MARCKSL1P49006 195 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 CYB561P49447 251 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 AGTR2P50052 363 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 DLX5P56178 289 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 PTK6Q13882 451 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 FAM53BQ14153 422 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 NDUFA9Q16795 377 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 SFT2D3Q587I9 215 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 PAPD4Q6PIY7 484 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 ACAD11Q709F0 780 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 PAQR7Q86WK9 346 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 RPS19BP1Q86WX3 136 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 KATNAL2Q8IYT4 538 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 ACRBPQ8NEB7 543 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 OR51Q1Q8NH59 317 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 GOT1L1Q8NHS2 421 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 TMEM125Q96AQ2 219 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 IQCDQ96DY2 449 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 C18orf12Q96KH6 178 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 GOLPH3Q9H4A6 298 aa15.3■□□□□ 0.04
CTDNEP1-211ENST00000575783 HCN3Q9P1Z3 774 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms