RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SMAPO00193 183 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 HAT1O14929 419 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 P2RX6O15547 441 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 FOXS1O43638 330 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 UNC5CO95185 931 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 WDPCPO95876 746 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SYF2O95926 243 aaKnown RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 F10P00742 488 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 CYC1P08574 325 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ITGAMP11215 1152 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 PRF1P14222 555 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ELAVL4P26378 380 aaKnown RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 AVPR1BP47901 424 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 CLCN7P51798 805 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SARNPP82979 210 aaKnown RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 TAP2Q03519 686 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 RBPJQ06330 500 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ZNF33BQ06732 778 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ART3Q13508 389 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 KCNJ11Q14654 390 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 LONRF1Q17RB8 773 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SYT16Q17RD7 645 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 THEMIS2Q5TEJ8 643 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 MEI1Q5TIA1 1274 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SP5Q6BEB4 398 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ZNF470Q6ECI4 717 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 NEPROQ6NW34 567 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 MTFR2Q6P444 385 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 CASC4Q6P4E1 433 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 TMEM207Q6UWW9 146 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 REXO1L1PQ8IX06 675 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 FBXO15Q8NCQ5 510 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 PPFIBP2Q8ND30 876 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 DNAJB8Q8NHS0 232 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ZNF480Q8WV37 535 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 METTL21AQ8WXB1 218 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 PKP4Q99569 1192 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 UNKQ9C0B0 810 aaKnown RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 CCDC68Q9H2F9 335 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SAMD15Q9P1V8 674 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 KLHL42Q9P2K6 505 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 GALPQ9UBC7 116 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 SEC14L3Q9UDX4 400 aa9.9□□□□□ -0.82
TVP23B-208ENST00000575261 C19orf25Q9UFG5 118 aaPredicted RBP9.9□□□□□ -0.82
TVP23B-208ENST00000575261 ANKRD17O75179 2603 aaKnown RBP9.89□□□□□ -0.83
TVP23B-208ENST00000575261 PDZD2O15018 2839 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 CTAGE9A4FU28 777 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 GOLGA6L6A8MZA4 724 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 H0YIG0 161 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 PRAMEF2O60811 474 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 NSA2O95478 260 aaKnown RBP9.89□□□□□ -0.83
TVP23B-208ENST00000575261 FGGP02679 453 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 ENO3P13929 434 aaPredicted RBP9.89□□□□□ -0.83
TVP23B-208ENST00000575261 CDC25BP30305 580 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 EFNA3P52797 238 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 MAT1AQ00266 395 aaKnown RBP9.89□□□□□ -0.83
TVP23B-208ENST00000575261 CUL1Q13616 776 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 MINDY4Q4G0A6 757 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 MFSD4BQ5TF39 518 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 RPTNQ6XPR3 784 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 CENPUQ71F23 418 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 MCEMP1Q8IX19 187 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 SPC24Q8NBT2 197 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 ITLN2Q8WWU7 325 aaPredicted RBP9.89□□□□□ -0.83
TVP23B-208ENST00000575261 KCNJ9Q92806 393 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 CCDC120Q96HB5 630 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 IMMP1LQ96LU5 166 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 VN1R1Q9GZP7 353 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 ABCF3Q9NUQ8 709 aa9.89□□□□□ -0.83
TVP23B-208ENST00000575261 MYO7BQ6PIF6 2116 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 TCRBV7S3A2A0A539 114 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 CCL21O00585 134 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 ZBTB14O43829 449 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 KIF5CO60282 957 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 AVILO75366 819 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 SEC24DO94855 1032 aaPredicted RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 MPC1LP0DKB6 136 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 MST1P26927 711 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 IMPA1P29218 277 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 PTGER4P35408 488 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 SKIV2L2P42285 1042 aaKnown RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 CA7P43166 264 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 KCNJ1P48048 391 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 VPS41P49754 854 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 CASP6P55212 293 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 RPS15AP62244 130 aaKnown RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 TBPL1P62380 186 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 THOC5Q13769 683 aaKnown RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 DHX34Q14147 1143 aaKnown RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 BTBD16Q32M84 506 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 PLAG1Q6DJT9 500 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 BNC2Q6ZN30 1099 aaPredicted RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 GDF7Q7Z4P5 450 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 PLD3Q8IV08 490 aa9.88□□□□□ -0.83
TVP23B-208ENST00000575261 ZNF808Q8N4W9 903 aaPredicted RBP9.88□□□□□ -0.83
TVP23B-208ENST00000575261 PRELID2Q8N945 189 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms