RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 HIST2H2ACQ16777 129 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 PLEKHG6Q3KR16 790 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CCSMST1Q4G0I0 132 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 SMUG1Q53HV7 270 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 GPRC6AQ5T6X5 926 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CES5AQ6NT32 575 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CYP2U1Q7Z449 544 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 DEPDC4Q8N2C3 294 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 VANGL1Q8TAA9 524 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 PXYLP1Q8TE99 480 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 GTPBP3Q969Y2 492 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 COL26A1Q96A83 441 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 EID2BQ96D98 161 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 APIPQ96GX9 242 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF599Q96NL3 588 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 TSPAN18Q96SJ8 248 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CTRCQ99895 268 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 HOXD1Q9GZZ0 328 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 FAM83DQ9H4H8 585 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 SUV39H2Q9H5I1 410 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 PDP1Q9P0J1 537 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 IL17CQ9P0M4 197 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ERVK-11Q9UQG0 969 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 B3GNT3Q9Y2A9 372 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 SPTBP11277 2137 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ANKRD34BA5PLL1 514 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 H0YAE9 185 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CYP7B1O75881 506 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 FGF4P08620 206 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ELFN1P0C7U0 828 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 TGM4P49221 684 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CLK3P49761 638 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF140P52738 457 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 CLCA4Q14CN2 919 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 SLC14A2Q15849 920 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 AHSA2Q719I0 299 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 MEX3DQ86XN8 651 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 DCP2Q8IU60 420 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 HID1Q8IV36 788 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 OSCP1Q8WVF1 389 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ATL1Q8WXF7 558 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 AP2M1Q96CW1 435 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 PPP3R2Q96LZ3 170 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 FOPNLQ96NB1 174 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF300Q96RE9 604 aaPredicted RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 BEX2Q9BXY8 128 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 DSN1Q9H410 356 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 MAGEE1Q9HCI5 957 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 ASF1AQ9Y294 204 aa8.27□□□□□ -1.09
RPAIN-215ENST00000575112 MRPS23Q9Y3D9 190 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 TNPO3Q9Y5L0 923 aaKnown RBP8.27□□□□□ -1.09
RPAIN-215ENST00000575112 TMEM202A6NGA9 273 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 FPGTO14772 594 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 AREL1O15033 823 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 FAM20BO75063 409 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 TRBC1P01850 177 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 RAP2AP10114 183 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ATP4BP51164 291 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 RPS14P62263 151 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 BEND5Q7L4P6 421 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 EID3Q8N140 333 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 STK40Q8N2I9 435 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF540Q8NDQ6 660 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 OR2AP1Q8NGE2 309 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 HDAC2Q92769 488 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PROX1Q92786 737 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 LGALS12Q96DT0 336 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PKMYT1Q99640 499 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PSD2Q9BQI7 771 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 MGME1Q9BQP7 344 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 SORBS1Q9BX66 1292 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PALMDQ9NP74 551 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 SIRT5Q9NXA8 310 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ELOVL2Q9NXB9 296 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 KLHL3Q9UH77 587 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 SNX6Q9UNH7 406 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 HCFC2Q9Y5Z7 792 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 WDFY3Q8IZQ1 3526 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PIKFYVEQ9Y2I7 2098 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ANKDD1BA6NHY2 528 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PDZK1P1A8MUH7 402 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 RGS5O15539 181 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 LEFTY1O75610 366 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ERAL1O75616 437 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 GABARAPO95166 117 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 VIPP01282 170 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 ANXA4P09525 319 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PRR35P0CG20 571 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 BCKDHAP12694 445 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 GGT1P19440 569 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 HTR1EP28566 365 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 PHC1P78364 1004 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 GALNT1Q10472 559 aaPredicted RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 IRF3Q14653 427 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 CXorf57Q6NSI4 855 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 GAREM2Q75VX8 874 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 OLIG3Q7RTU3 272 aa8.26□□□□□ -1.09
RPAIN-215ENST00000575112 EFL1Q7Z2Z2 1120 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 C1orf52Q8N6N3 182 aaKnown RBP8.26□□□□□ -1.09
RPAIN-215ENST00000575112 DHRS7Q9Y394 339 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms