RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ZFP28Q8NHY6 868 aa22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 TMIGD2Q96BF3 282 aa22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 RBM38Q9H0Z9 239 aaKnown RBP22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 EPB41L1Q9H4G0 881 aa22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 PAPOLBQ9NRJ5 636 aaKnown RBP22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 GDE1Q9NZC3 331 aa22.82■■□□□ 1.24
NPLOC4-217ENST00000574897 CKAP5Q14008 2032 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 GABRR3A8MPY1 467 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 C1QTNF3-AMACRE9PGA6 284 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 CLIC1O00299 241 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 MID1O15344 667 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 TAS2R38P59533 333 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 PCDH1Q08174 1060 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 ABHD18Q0P651 414 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 PLCL1Q15111 1095 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 IER5LQ5T953 404 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 TTC33Q6PID6 262 aaPredicted RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 FBXO15Q8NCQ5 510 aaPredicted RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 CHTF18Q8WVB6 975 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 REXO5Q96IC2 774 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 DPH2Q9BQC3 489 aaPredicted RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 SGPP1Q9BX95 441 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 SMURF2Q9HAU4 748 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 LTB4R2Q9NPC1 389 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 SERGEFQ9UGK8 458 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 PADI4Q9UM07 663 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 CLCN2P51788 898 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 SRSF11Q05519 484 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 ZNF33BQ06732 778 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 E2F2Q14209 437 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 TMEM179BQ7Z7N9 219 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 LINC00615Q96LM1 132 aaPredicted RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 OR52A5Q9H2C5 316 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 CLK4Q9HAZ1 481 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 ASF1AQ9Y294 204 aa22.81■■□□□ 1.24
NPLOC4-217ENST00000574897 GOLGA4Q13439 2230 aaKnown RBP22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 CCDC160A6NGH7 325 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 SCAMP2O15127 329 aaKnown RBP22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 TGFB1P01137 390 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 RETP07949 1114 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 MAPK9P45984 424 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 SOX9P48436 509 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 NR1H2P55055 460 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 ZCCHC8Q6NZY4 707 aaKnown RBP22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 OR8J2Q8NGG1 315 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 HM13Q8TCT9 377 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 RPP25Q9BUL9 199 aaKnown RBP22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 DUSP26Q9BV47 211 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 ACAT2Q9BWD1 397 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 OR51B5Q9H339 312 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 TRPV4Q9HBA0 871 aa22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 EXO1Q9UQ84 846 aaKnown RBP22.8■■□□□ 1.24
NPLOC4-217ENST00000574897 GNG14A0A1W2PPG7 69 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 PIPSLA2A3N6 862 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 MGAT4DA6NG13 374 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 AHCYL1O43865 530 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 MYO1DO94832 1006 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 ALPLP05186 524 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 HSD3B1P14060 373 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 HSD3B2P26439 372 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 ADARB1P78563 741 aaKnown RBP22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 FCHO2Q0JRZ9 810 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 LRRC23Q53EV4 343 aaPredicted RBP22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 CPA6Q8N4T0 437 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 TRIML2Q8N7C3 387 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 COX14Q96I36 57 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 HDAC8Q9BY41 377 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 DYRK1BQ9Y463 629 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 NOBOXO60393 691 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 PRMT3O60678 531 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 C1GALT1C1LP0DN25 315 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 C7P10643 843 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 PNLIPRP1P54315 467 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 DAG1Q14118 895 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 DPY19L1Q2PZI1 675 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 PNCKQ6P2M8 343 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 MSANTD1Q6ZTZ1 278 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 ARMCX6Q7L4S7 300 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 DSG4Q86SJ6 1040 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 C8orf4Q9NR00 106 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 DNAJB9Q9UBS3 223 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 GPR34Q9UPC5 381 aa22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 TDRKHQ9Y2W6 561 aaKnown RBP22.79■■□□□ 1.24
NPLOC4-217ENST00000574897 HEATR5BQ9P2D3 2071 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 C17orf113A0A1B0GUU1 675 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 PCDH7O60245 1069 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 PCDH8O95206 1070 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 TIA1P31483 386 aaKnown RBP eCLIP22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 TRPC1P48995 793 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 WSCD2Q2TBF2 565 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 ZNF385BQ569K4 471 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 OR52E4Q8NGH9 312 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 NCSTNQ92542 709 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 KLK6Q92876 244 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 DGCR14Q96DF8 476 aaKnown RBP22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 ZNF514Q96K75 400 aaPredicted RBP22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 MYADMQ96S97 322 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 AASDHPPTQ9NRN7 309 aa22.78■■□□□ 1.24
NPLOC4-217ENST00000574897 AP3M1Q9Y2T2 418 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms