RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 EPB42P16452 691 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 ARF3P61204 181 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 NFKB2Q00653 900 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 MEF2AQ02078 507 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 MAP7Q14244 749 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 WASHC2DQ5SRD0 308 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 ATG9BQ674R7 924 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 TBC1D19Q8N5T2 526 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 ZNF655Q8N720 491 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 BANPQ8N9N5 519 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 SMC6Q96SB8 1091 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 AIF1LQ9BQI0 150 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 SLC7A5P2Q9GIP4 190 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 EHD1Q9H4M9 534 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 SYNPO2LQ9H987 977 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 ACTR5Q9H9F9 607 aaPredicted RBP31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 ANGPTL3Q9Y5C1 460 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 CELSR3Q9NYQ7 3312 aa31.66■■■□□ 2.66
CTDNEP1-209ENST00000574205 A8MT66 165 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 SIX3O95343 332 aaPredicted RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 HBQ1P09105 142 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 EPORP19235 508 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 GRM7Q14831 915 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 NLGN4XQ8N0W4 816 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 TEX9Q8N6V9 391 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 NLGN4YQ8NFZ3 816 aaPredicted RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 SRPK3Q9UPE1 567 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 PCDHGA4Q9Y5G9 962 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 URB1O60287 2271 aaKnown RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 SEC16AO15027 2179 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 TRBC2A0A5B9 178 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 FITM1A5D6W6 292 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 LRRC14BA6NHZ5 514 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 E2F3O00716 465 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 EIF2S1P05198 315 aaKnown RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 EEF1DP29692 281 aaKnown RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 PIK3CGP48736 1102 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 REEP5Q00765 189 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 KCNE4Q8WWG9 221 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 RNF31Q96EP0 1072 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 PGM2Q96G03 612 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 LRFN5Q96NI6 719 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 IQCGQ9H095 443 aaKnown RBP31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 CENPHQ9H3R5 247 aa31.65■■■□□ 2.66
CTDNEP1-209ENST00000574205 DMXL2Q8TDJ6 3036 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 PLIN3O60664 434 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 RAD1O60671 282 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 KATNA1O75449 491 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 PROCP04070 461 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 ATP5F1P24539 256 aaPredicted RBP31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 CXCR2P25025 360 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 BCL6P41182 706 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 C6orf15Q6UXA7 325 aaPredicted RBP31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 TIPARPQ7Z3E1 657 aaKnown RBP31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 ESX1Q8N693 406 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 TTC29Q8NA56 475 aaPredicted RBP31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 SLC38A9Q8NBW4 561 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 GALNT6Q8NCL4 622 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 CLIP3Q96DZ5 547 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 RUFY1Q96T51 708 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 NDC1Q9BTX1 674 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 SPNS1Q9H2V7 528 aa31.64■■■□□ 2.66
CTDNEP1-209ENST00000574205 TXNDC9O14530 226 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 LCMT2O60294 686 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 DLX3O60479 287 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 H2AFYO75367 372 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 VARSP26640 1264 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 EIF2S3P41091 472 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 ARSFP54793 590 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 PCDH1Q08174 1060 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 GTF2H2Q13888 395 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 XKR6Q5GH73 641 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 TNFAIP8L3Q5GJ75 292 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 YOD1Q5VVQ6 348 aaPredicted RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 RHBDD2Q6NTF9 364 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 GTF2H2CQ6P1K8 395 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 SLC22A9Q8IVM8 553 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 CSNK1A1LQ8N752 337 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 MFSD9Q8NBP5 474 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 ZNF740Q8NDX6 193 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 WDR34Q96EX3 536 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 PTCD3Q96EY7 689 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 STARD5Q9NSY2 213 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 GEMIN8Q9NWZ8 242 aaKnown RBP31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 RAXQ9Y2V3 346 aa31.63■■■□□ 2.65
CTDNEP1-209ENST00000574205 TEX51A0A1B0GUA7 166 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 TAF4O00268 1085 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 OR1F1O43749 312 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 GCGRP47871 477 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 IRF8Q02556 426 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 TBCCQ15814 346 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 VN1R4Q7Z5H5 301 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 RDH11Q8TC12 318 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 NKD1Q969G9 470 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 NAF1Q96HR8 494 aaKnown RBP31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 CNTNAP3BQ96NU0 1288 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 C1QTNF3Q9BXJ4 246 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 CNTNAP3Q9BZ76 1288 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 DPH1Q9BZG8 443 aa31.62■■■□□ 2.65
CTDNEP1-209ENST00000574205 PITHD1Q9GZP4 211 aaPredicted RBP31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms