RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 NDUFA9Q16795 377 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PFKFB4Q16877 469 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZXDCQ2QGD7 858 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 MUM1Q2TAK8 710 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 FRMPD2BQ6IN97 320 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 CCDC81Q6ZN84 652 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TMPRSS11BQ86T26 416 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 DSELQ8IZU8 1212 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 KRT78Q8N1N4 520 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 CAMKVQ8NCB2 501 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 UBTD2Q8WUN7 234 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 MR1Q95460 341 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 OR4K3Q96R72 315 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 TMEM79Q9BSE2 394 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PITHD1Q9GZP4 211 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 ENAMQ9NRM1 1142 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 XPR1Q9UBH6 696 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 NDOR1Q9UHB4 597 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 PLAAQ9Y263 795 aa12.21□□□□□ -0.45
TRAPPC1-206ENST00000573989 LOC105369274A0A096LPK9 316 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 LOC102723532A0A0G2JNH3 316 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 A0A1B0GX78 115 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TRBC2A0A5B9 178 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCDC151A5D8V7 595 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 C21orf140B9A014 251 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 C9J4A7 227 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 H3BMH7 237 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GOLGA8RI6L899 631 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 K7EPI3 171 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 KLK8O60259 260 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GLRA3O75311 464 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 KATNA1O75449 491 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 EPB42P16452 691 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TCN2P20062 427 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 RPS15P62841 145 aaKnown RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 DCDP81605 110 aaKnown RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TLE3Q04726 772 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GPS2Q13227 327 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 LAPTM5Q13571 262 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 NAA30Q147X3 362 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 C18orf21Q32NC0 220 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 PAGE2BQ5JRK9 111 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 PRAMEF17Q5VTA0 474 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GARNL3Q5VVW2 1013 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 OR4N4Q8N0Y3 316 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 CSNK1A1LQ8N752 337 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 TTLQ8NG68 377 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 OR2W6PQ8NHA6 318 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 MZB1Q8WU39 189 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 OR2A5Q96R48 311 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 SARGQ9BW04 601 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GPR87Q9BY21 358 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 IQCGQ9H095 443 aaKnown RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 EHD1Q9H4M9 534 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 CUTCQ9NTM9 273 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF358Q9NW07 568 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 GRID1Q9ULK0 1009 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 CDC14AQ9UNH5 594 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 SH2B3Q9UQQ2 575 aa12.2□□□□□ -0.46
TRAPPC1-206ENST00000573989 FEZF1A0PJY2 475 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 HYKKA2RU49 373 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 STX16-NPEPL1H3BU86 382 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 COPEO14579 308 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 STX16O14662 325 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 DSCR3O14972 297 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 OR1F1O43749 312 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 NRP2O60462 931 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC35G6P0C7Q6 338 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 C1GALT1C1LP0DN25 315 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 MTHFD2P13995 350 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 ITPKBP27987 946 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 GSTM2P28161 218 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 HPDP32754 393 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 RORAP35398 523 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 AHRP35869 848 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 DLSTP36957 453 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 SKP1P63208 163 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 MC1RQ01726 317 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 IRF8Q02556 426 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 FBXO48Q5FWF7 155 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 XKR6Q5GH73 641 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 CATSPEREQ5SY80 951 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 ATG9BQ674R7 924 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PRMT9Q6P2P2 845 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 ASPGQ86U10 573 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 VASH2Q86V25 355 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PLD3Q8IV08 490 aa12.19□□□□□ -0.46
TRAPPC1-206ENST00000573989 PTGR2Q8N8N7 351 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms