RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PLA2G3Q9NZ20 509 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 SNX12Q9UMY4 172 aa17.19■□□□□ 0.34
CHD3-214ENST00000572579 PCM1Q15154 2024 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 LOC102723996A0A087X1L8 192 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 IGHV1-45A0A0A0MS14 117 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 ANKUB1A6NFN9 424 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 ZBTB14O43829 449 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 LCMT2O60294 686 aaKnown RBP17.18■□□□□ 0.34
CHD3-214ENST00000572579 KLHL41O60662 606 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 VPS26AO75436 327 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 PRR35P0CG20 571 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 COL8A1P27658 744 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 CSNK1G2P78368 415 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 EEF1A2Q05639 463 aaKnown RBP17.18■□□□□ 0.34
CHD3-214ENST00000572579 MFAP5Q13361 173 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 PCOLCEQ15113 449 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 GARNL3Q5VVW2 1013 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 NDUFAF7Q7L592 441 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 OR9A4Q8NGU2 314 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 MVB12AQ96EY5 273 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 LMF1Q96S06 567 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 EBNA1BP2Q99848 306 aaKnown RBP17.18■□□□□ 0.34
CHD3-214ENST00000572579 SLC29A3Q9BZD2 475 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 DDX47Q9H0S4 455 aaKnown RBP17.18■□□□□ 0.34
CHD3-214ENST00000572579 TRMT1Q9NXH9 659 aaKnown RBP17.18■□□□□ 0.34
CHD3-214ENST00000572579 IKZF3Q9UKT9 509 aa17.18■□□□□ 0.34
CHD3-214ENST00000572579 KCNE1BA0A087WTH5 132 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 DNALI1O14645 258 aaPredicted RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 TP73O15350 636 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 NRDCO43847 1150 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 BMP10O95393 424 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 PGAM1P18669 254 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 TSFMP43897 325 aaKnown RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 TBPL1P62380 186 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 FAM53BQ14153 422 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 ZNF169Q14929 603 aaPredicted RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 HP1BP3Q5SSJ5 553 aaPredicted RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 B3GNTL1Q67FW5 361 aaPredicted RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 TMEM205Q6UW68 189 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 ISLR2Q6UXK2 745 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 ADCK2Q7Z695 626 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 CNTN4Q8IWV2 1026 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 CALML6Q8TD86 181 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 BRIX1Q8TDN6 353 aaKnown RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 TM4SF19Q96DZ7 209 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 NAP1L3Q99457 506 aaPredicted RBP17.17■□□□□ 0.34
CHD3-214ENST00000572579 FAM167BQ9BTA0 163 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 YIPF2Q9BWQ6 316 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 ATG10Q9H0Y0 220 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 CCDC68Q9H2F9 335 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 TMEM184CQ9NVA4 438 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 CDC14AQ9UNH5 594 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 HEATR5BQ9P2D3 2071 aa17.17■□□□□ 0.34
CHD3-214ENST00000572579 FEZF1A0PJY2 475 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 ZNF839A8K0R7 811 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 MAP2K7O14733 419 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 DNAJB6O75190 326 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 CCNDBP1O95273 360 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 BCL6P41182 706 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 PTK6Q13882 451 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 TEDDM1Q5T9Z0 273 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 TRMT10BQ6PF06 316 aaKnown RBP17.16■□□□□ 0.34
CHD3-214ENST00000572579 PDSS2Q86YH6 399 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 KBTBD2Q8IY47 623 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 SLCO2A1Q92959 643 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 RERGQ96A58 199 aaPredicted RBP17.16■□□□□ 0.34
CHD3-214ENST00000572579 CNDP1Q96KN2 507 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 IMMP1LQ96LU5 166 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 SGPP1Q9BX95 441 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 VN1R1Q9GZP7 353 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 DRC3Q9H069 523 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 MKKSQ9NPJ1 570 aaPredicted RBP17.16■□□□□ 0.34
CHD3-214ENST00000572579 PTGFRNQ9P2B2 879 aa17.16■□□□□ 0.34
CHD3-214ENST00000572579 NSG1A0A0A6YYJ2 146 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 IGHV3-20A0A0C4DH32 117 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 USP27XA6NNY8 438 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 EIF3FO00303 357 aaPredicted RBP17.15■□□□□ 0.34
CHD3-214ENST00000572579 CES2O00748 559 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 WISP2O76076 250 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 SERPINA7P05543 415 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 HEXBP07686 556 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 NPPBP16860 134 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 SRSF11Q05519 484 aaKnown RBP17.15■□□□□ 0.34
CHD3-214ENST00000572579 CDC16Q13042 620 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 NAE1Q13564 534 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 PPP1R7Q15435 360 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 THEMIS2Q5TEJ8 643 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 ZNF324BQ6AW86 544 aaPredicted RBP17.15■□□□□ 0.34
CHD3-214ENST00000572579 TMEM214Q6NUQ4 689 aaKnown RBP17.15■□□□□ 0.34
CHD3-214ENST00000572579 AGTRAPQ6RW13 159 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 TMEM207Q6UWW9 146 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 SIRT6Q8N6T7 355 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 KCT2Q8NC54 265 aa17.15■□□□□ 0.34
CHD3-214ENST00000572579 ST6GALNAC3Q8NDV1 305 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms