RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 PFDN6O15212 129 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 SEC24DO94855 1032 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 ALDH6A1Q02252 535 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 TSTA3Q13630 321 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 GBX1Q14549 363 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 OASLQ15646 514 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 BTBD16Q32M84 506 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 CTSL3PQ5NE16 218 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 ACER2Q5QJU3 275 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 RNF187Q5TA31 235 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 CPEB2Q7Z5Q1 589 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 BEST3Q8N1M1 668 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 OTUD6BQ8N6M0 293 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 CHTF18Q8WVB6 975 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 ATG4AQ8WYN0 398 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 EBNA1BP2Q99848 306 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 VN1R1Q9GZP7 353 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 SYNPO2LQ9H987 977 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 TREX1Q9NSU2 369 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 TAC3Q9UHF0 121 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 PCYOX1Q9UHG3 505 aa17.96■□□□□ 0.47
SCARF1-204ENST00000570902 TSR3Q9UJK0 312 aaKnown RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 PACSIN2Q9UNF0 486 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-204ENST00000570902 ARHGEF33A8MVX0 844 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 H0YIG0 161 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 C19orf84I3L1E1 186 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 LIASO43766 372 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 CATP04040 527 aaKnown RBP17.95■□□□□ 0.46
SCARF1-204ENST00000570902 CD46P15529 392 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 EEF1DP29692 281 aaKnown RBP17.95■□□□□ 0.46
SCARF1-204ENST00000570902 PNLIPRP1P54315 467 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 ABATP80404 500 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 MAT1AQ00266 395 aaKnown RBP17.95■□□□□ 0.46
SCARF1-204ENST00000570902 TUBA3CQ13748 450 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 MEP1AQ16819 746 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 MFSD4BQ5TF39 518 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 MRNIPQ6NTE8 343 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 H3F3CQ6NXT2 135 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 TUBA3EQ6PEY2 450 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 SDCCAG8Q86SQ7 713 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-204ENST00000570902 CEP97Q8IW35 865 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 MCOLN3Q8TDD5 553 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 BIRC8Q96P09 236 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 CYTH2Q99418 400 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 SPOCK3Q9BQ16 436 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 UTP23Q9BRU9 249 aaKnown RBP17.95■□□□□ 0.46
SCARF1-204ENST00000570902 IL22Q9GZX6 179 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 ZNF148Q9UQR1 794 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 CCDC168Q8NDH2 2452 aa17.95■□□□□ 0.46
SCARF1-204ENST00000570902 NCOA6Q14686 2063 aaPredicted RBP17.94■□□□□ 0.46
SCARF1-204ENST00000570902 ASPDHA6ND91 283 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 AP3B1O00203 1094 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 PSIP1O75475 530 aaKnown RBP17.94■□□□□ 0.46
SCARF1-204ENST00000570902 WISP2O76076 250 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 FTCDO95954 541 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 ESR1P03372 595 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 CHRM3P20309 590 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 FMO4P31512 558 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 EFNA3P52797 238 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 SESN2P58004 480 aaPredicted RBP17.94■□□□□ 0.46
SCARF1-204ENST00000570902 PTK6Q13882 451 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 TESK1Q15569 626 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 OR1C1Q15619 314 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 EXT1Q16394 746 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 MINDY4Q4G0A6 757 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 SPNS3Q6ZMD2 512 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 ADCK2Q7Z695 626 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 CDH24Q86UP0 819 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 HORMAD2Q8N7B1 307 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 CCDC89Q8N998 374 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 TMEM178AQ8NBL3 297 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 FAM98AQ8NCA5 519 aaKnown RBP17.94■□□□□ 0.46
SCARF1-204ENST00000570902 MDS2Q8NDY4 140 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 SCMH1Q96GD3 660 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 KCNK13Q9HB14 408 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 KLHL1Q9NR64 748 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 PAK5Q9P286 719 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 ZFHX3Q15911 3703 aa17.94■□□□□ 0.46
SCARF1-204ENST00000570902 IGHV3-20A0A0C4DH32 117 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 NPIPA5E9PKD4 350 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 P2RX6O15547 441 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 NIPSNAP2O75323 286 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 NSA2O95478 260 aaKnown RBP17.93■□□□□ 0.46
SCARF1-204ENST00000570902 KIR3DL1P43629 444 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 AGTR2P50052 363 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 ADARP55265 1226 aaKnown RBP17.93■□□□□ 0.46
SCARF1-204ENST00000570902 FCRLBQ6BAA4 426 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 LANCL3Q6ZV70 420 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 EID3Q8N140 333 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 AMER2Q8N7J2 671 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 OR9A4Q8NGU2 314 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 SIGLEC12Q96PQ1 595 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 TCF12Q99081 682 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 PKP4Q99569 1192 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 EIF2B3Q9NR50 452 aaKnown RBP17.93■□□□□ 0.46
SCARF1-204ENST00000570902 NPIPA1Q9UND3 350 aa17.93■□□□□ 0.46
SCARF1-204ENST00000570902 SMAPO00193 183 aa17.92■□□□□ 0.46
SCARF1-204ENST00000570902 HAT1O14929 419 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms