RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MYBPHLA2RUH7 354 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 FAM149AA5PLN7 773 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 C3orf70A6NLC5 250 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 C2CD4BA6NLJ0 364 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SIGLEC16A6NMB1 481 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OR52A4PA6NMU1 304 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GABRR3A8MPY1 467 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 FADS2P1A8MWK0 482 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CDRT15L2A8MXV6 281 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 A8MZ25 164 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MIF4GDA9UHW6 222 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 KDM4EB2RXH2 506 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 TCP11X1B4DZS4 312 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 AGPSO00116 658 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 BTN3A1O00481 513 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 NR5A2O00482 541 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PEX12O00623 359 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CHUKO15111 745 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MDM4O15151 490 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 KCNAB3O43448 404 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PSTPIP1O43586 416 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 NOBOXO60393 691 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 HUS1O60921 280 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 LRCH4O75427 683 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CABYRO75952 493 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DNAJB5O75953 348 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 KAT7O95251 611 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PIGNO95427 931 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TRUB2O95900 331 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 AMHP03971 560 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GBAP04062 536 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 LPLP06858 475 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RPS17P08708 135 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZSCAN5DPP0CG00 497 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MLNP12872 115 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CCL5P13501 91 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RPA2P15927 270 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 VCLP18206 1134 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ITIH1P19827 911 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RAB4AP20338 218 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 NT5EP21589 574 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GPD1P21695 349 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DRD5P21918 477 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GRNP28799 593 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 SERPINA4P29622 427 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MIPP30301 263 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC8A1P32418 973 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SERPINB6P35237 376 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ATP5C1P36542 298 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 COILP38432 576 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 PBX3P40426 434 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RPL21P46778 160 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 GPR15P49685 360 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PGFP49763 221 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CDK7P50613 346 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CLCN7P51798 805 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MFAP4P55083 255 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CCL23P55773 120 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 RAB4BP61018 213 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DYNLT1P63172 113 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC25A11Q02978 314 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 ADIGQ0VDE8 80 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MALLQ13021 153 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 STX5Q13190 355 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PMS2P3Q13401 168 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TDGQ13569 410 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 IL11RAQ14626 422 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PDK3Q15120 406 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TRIP13Q15645 432 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 CYP1B1Q16678 543 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 CA9Q16790 459 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 UPP1Q16831 310 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SYT16Q17RD7 645 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 HKDC1Q2TB90 917 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 MOGAT2Q3SYC2 334 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SLC44A4Q53GD3 710 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 PITRM1Q5JRX3 1037 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 KHDC1LQ5JSQ8 128 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 WLSQ5T9L3 541 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 SDHAF4Q5VUM1 108 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 OTUD1Q5VV17 481 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 WBP2NLQ6ICG8 309 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ESRP1Q6NXG1 681 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 DCUN1D2Q6PH85 259 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ZDHHC24Q6UX98 284 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 IL20RBQ6UXL0 311 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 ADAMTSL4Q6UY14 1074 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMG6-208ENST00000570874 CLEC20AQ6ZU45 233 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GPRIN3Q6ZVF9 776 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 UTS2BQ765I0 119 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TAS1R1Q7RTX1 841 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TRMT11Q7Z4G4 463 aaKnown RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 PIGZQ86VD9 579 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 TMEM173Q86WV6 379 aaPredicted RBP3.45□□□□□ -1.86
SMG6-208ENST00000570874 MISPQ8IVT2 679 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 GPR65Q8IYL9 337 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 DSELQ8IZU8 1212 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 FUKQ8N0W3 1084 aa3.45□□□□□ -1.86
SMG6-208ENST00000570874 IQCKQ8N0W5 287 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms