RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PRICKLE3O43900 615 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-225ENST00000569245 LTA4HP09960 611 aaKnown RBP13.87□□□□□ -0.19
COMMD4-225ENST00000569245 CCDC166P0CW27 439 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 CMPK1P30085 196 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 RGS4P49798 205 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 PNLIPRP1P54315 467 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 DCDP81605 110 aaKnown RBP13.87□□□□□ -0.19
COMMD4-225ENST00000569245 IRF9Q00978 393 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 DLG1Q12959 904 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 ARHGAP19Q14CB8 494 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 UGT8Q16880 541 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 THEMIS2Q5TEJ8 643 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 RHBDD2Q6NTF9 364 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 PRICKLE2Q7Z3G6 844 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 OR2A1Q8NGT9 310 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 PROKR1Q8TCW9 393 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 TCP10LQ8TDR4 215 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 ANKRD49Q8WVL7 239 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 THAP4Q8WY91 577 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 DLG3Q92796 817 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 GPR78Q96P69 363 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 C17orf62Q9BQA9 187 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 DERL2Q9GZP9 239 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 IQCGQ9H095 443 aaKnown RBP13.87□□□□□ -0.19
COMMD4-225ENST00000569245 IGSF5Q9NSI5 407 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 STARD5Q9NSY2 213 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 DHCR7Q9UBM7 475 aaKnown RBP13.87□□□□□ -0.19
COMMD4-225ENST00000569245 NDOR1Q9UHB4 597 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 TCFL5Q9UL49 500 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 PADI2Q9Y2J8 665 aa13.87□□□□□ -0.19
COMMD4-225ENST00000569245 CCDC189A1A4V9 331 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 H3BMH7 237 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 GFYI3L273 518 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 TSPAN12O95859 305 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 SLC16A8O95907 504 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 EIF2S1P05198 315 aaKnown RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 CD1DP15813 335 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 GMPRP36959 345 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 VSX2P58304 361 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 IL2P60568 153 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 ATP6V0D1P61421 351 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NFKB2Q00653 900 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 IL10RAQ13651 578 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 CSHL1Q14406 222 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 GRM7Q14831 915 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 SLC9A5Q14940 896 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NAA25Q14CX7 972 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NCF4Q15080 339 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 FAM83EQ2M2I3 478 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 TCTE1Q5JU00 501 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 FAM69BQ5VUD6 431 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 FAM198BQ6UWH4 519 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 CYHR1Q6ZMK1 362 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 TTLL10Q6ZVT0 673 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 MYO1HQ8N1T3 1032 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 TTC29Q8NA56 475 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 PPFIBP2Q8ND30 876 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 C9orf43Q8TAL5 461 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 EEF1AKMT1Q8WVE0 214 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 KCTD4Q8WVF5 259 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NXNL1Q96CM4 212 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 DPH7Q9BTV6 452 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NMRAL1Q9HBL8 299 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 MRPS30Q9NP92 439 aaKnown RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 ZNF71Q9NQZ8 489 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 NKIRAS1Q9NYS0 192 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 IFT80Q9P2H3 777 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 TUBD1Q9UJT1 453 aa13.86□□□□□ -0.19
COMMD4-225ENST00000569245 FASNP49327 2511 aaKnown RBP13.86□□□□□ -0.19
COMMD4-225ENST00000569245 A0A0J9YVX5 310 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 A0A1W2PPV9 198 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 PABPN1LA6NDY0 278 aaKnown RBP13.85□□□□□ -0.19
COMMD4-225ENST00000569245 MKRN2OSH3BPM6 223 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 SLC28A2O43868 658 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 CTSVO60911 334 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 CCNDBP1O95273 360 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 CAPN1P07384 714 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ETV4P43268 484 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ARSFP54793 590 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ACAP2Q15057 778 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 CCDC153Q494R4 210 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 NKAIN1Q4KMZ8 207 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 PTRH1Q86Y79 214 aaKnown RBP13.85□□□□□ -0.19
COMMD4-225ENST00000569245 FBXO15Q8NCQ5 510 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-225ENST00000569245 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ZNF480Q8WV37 535 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 LINGO1Q96FE5 620 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ABHD17AQ96GS6 310 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 GBP5Q96PP8 586 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ZNF358Q9NW07 568 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 UTP6Q9NYH9 597 aaKnown RBP13.85□□□□□ -0.19
COMMD4-225ENST00000569245 TMEM216Q9P0N5 145 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 SLC17A7Q9P2U7 560 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 TAC3Q9UHF0 121 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 EMCNQ9ULC0 261 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ZNF462Q96JM2 2506 aa13.85□□□□□ -0.19
COMMD4-225ENST00000569245 ARGFXA6NJG6 315 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms