RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MLYCDO95822 493 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 TUBB4AP04350 444 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 C8GP07360 202 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 HIST1H2AGP0C0S8 130 aaPredicted RBP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 HIST1H2ADP20671 130 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 TERF1P54274 439 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 SP140Q13342 867 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 CCDC137Q6PK04 289 aaKnown RBP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 UBE2R2Q712K3 238 aaPredicted RBP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 CAND1Q86VP6 1230 aaKnown RBP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 C8orf44Q96CB5 159 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 HIST1H2AHQ96KK5 128 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 CCDC138Q96M89 665 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 SERPINB12Q96P63 405 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 HIST1H2AJQ99878 128 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 NAT9Q9BTE0 207 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 H2AFJQ9BTM1 129 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 ZNF700Q9H0M5 742 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 FBXO6Q9NRD1 293 aaPredicted RBP17.67■□□□□ 0.42
LINC01238-205ENST00000567549 TAS2R13Q9NYV9 303 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 ABI3Q9P2A4 366 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 PTGFRNQ9P2B2 879 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 MKL2Q9ULH7 1088 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 NTNG1Q9Y2I2 539 aa17.67■□□□□ 0.42
LINC01238-205ENST00000567549 KCNE1BA0A087WTH5 132 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 LOC102723996A0A087X1L8 192 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 ENO4A6NNW6 628 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 PGRMC1O00264 195 aaKnown RBP17.66■□□□□ 0.42
LINC01238-205ENST00000567549 NSA2O95478 260 aaKnown RBP17.66■□□□□ 0.42
LINC01238-205ENST00000567549 C8orf89P0DMQ9 161 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 COILP38432 576 aaPredicted RBP17.66■□□□□ 0.42
LINC01238-205ENST00000567549 SLC1A2P43004 574 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 AGTR2P50052 363 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 EEF1A2Q05639 463 aaKnown RBP17.66■□□□□ 0.42
LINC01238-205ENST00000567549 Q0VFX4 171 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 HKDC1Q2TB90 917 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 MTFR2Q6P444 385 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 PPIL6Q8IXY8 311 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 MYO1HQ8N1T3 1032 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 RASGEF1CQ8N431 466 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 GPATCH11Q8N954 259 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 DNAJB8Q8NHS0 232 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 BRIX1Q8TDN6 353 aaKnown RBP17.66■□□□□ 0.42
LINC01238-205ENST00000567549 GPR21Q99679 349 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 TRIM54Q9BYV2 358 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 ABCF3Q9NUQ8 709 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 FBXO5Q9UKT4 447 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 OSGIN2Q9Y236 505 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 CSAG2Q9Y5P2 127 aa17.66■□□□□ 0.42
LINC01238-205ENST00000567549 NOTCH2Q04721 2471 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 A0A0A6YYC8 382 aaPredicted RBP17.65■□□□□ 0.42
LINC01238-205ENST00000567549 KRT87PA6NCN2 255 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 I3L1I5 382 aaPredicted RBP17.65■□□□□ 0.42
LINC01238-205ENST00000567549 KIF2AO00139 706 aaPredicted RBP17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SLC16A5O15375 505 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 LRRTM2O43300 516 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 KLHL18O94889 574 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SLC35G6P0C7Q6 338 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 IL10P22301 178 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SOX11P35716 441 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 FNTAP49354 379 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 TNFSF10P50591 281 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 RBPJQ06330 500 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 CTBP1Q13363 440 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 CUL1Q13616 776 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 MFSD4BQ5TF39 518 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 C17orf64Q86WR6 236 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 AMER3Q8N944 861 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SLX1AQ9BQ83 275 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 HAUS8Q9BT25 410 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 ANKHQ9HCJ1 492 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SUCOQ9UBS9 1254 aaKnown RBP17.65■□□□□ 0.42
LINC01238-205ENST00000567549 PPP2R2CQ9Y2T4 447 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 ZGRF1Q86YA3 2104 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 UNC79Q9P2D8 2635 aa17.65■□□□□ 0.42
LINC01238-205ENST00000567549 SVILO95425 2214 aa17.64■□□□□ 0.42
LINC01238-205ENST00000567549 IGKV1-8A0A0C4DH67 115 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 ZCWPW2A0A1B0GU75 182 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 GOLGA8MH3BSY2 632 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 HAT1O14929 419 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 JRKO75564 520 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 MED26O95402 600 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 STSP08842 583 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 PGAM1P18669 254 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 IMPA1P29218 277 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 CASP6P55212 293 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 NAA30Q147X3 362 aaPredicted RBP17.64■□□□□ 0.41
LINC01238-205ENST00000567549 PPP1R7Q15435 360 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 CYP1B1Q16678 543 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 TMEM205Q6UW68 189 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 KIAA0408Q6ZU52 694 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 LAPTM4BQ86VI4 370 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 DENND6AQ8IWF6 608 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 C17orf53Q8N3J3 647 aaPredicted RBP17.64■□□□□ 0.41
LINC01238-205ENST00000567549 PPFIBP2Q8ND30 876 aa17.64■□□□□ 0.41
LINC01238-205ENST00000567549 CD200R1Q8TD46 325 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms