RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SUN3Q8TAQ9 357 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 CD200R1Q8TD46 325 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 PPP4R1Q8TF05 950 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 FAR1Q8WVX9 515 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 SLC13A3Q8WWT9 602 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 THAP11Q96EK4 314 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 MVB12AQ96EY5 273 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 CFAP36Q96G28 342 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 C10orf90Q96M02 699 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 CYTH2Q99418 400 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 DRC3Q9H069 523 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 PCBD2Q9H0N5 130 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 DDX47Q9H0S4 455 aaKnown RBP6.09□□□□□ -1.43
TCF4-228ENST00000565393 ANKHQ9HCJ1 492 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 ENAMQ9NRM1 1142 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 C14orf105Q9NVL8 296 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 ARL15Q9NXU5 204 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 ADAMTS6Q9UKP5 1117 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 SNX12Q9UMY4 172 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 NOVA2Q9UNW9 492 aaKnown RBP6.09□□□□□ -1.43
TCF4-228ENST00000565393 PDE10AQ9Y233 779 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 OSGIN2Q9Y236 505 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 NTNG1Q9Y2I2 539 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 MED16Q9Y2X0 877 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 VWA7Q9Y334 891 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 MRPS2Q9Y399 296 aaKnown RBP6.09□□□□□ -1.43
TCF4-228ENST00000565393 PCDHGA10Q9Y5H3 936 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 ZNF462Q96JM2 2506 aa6.09□□□□□ -1.43
TCF4-228ENST00000565393 FASNP49327 2511 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 IGLV3-12A0A075B6K2 115 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 KCNE1BA0A087WTH5 132 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 IGHV1-45A0A0A0MS14 117 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 IGHV3-20A0A0C4DH32 117 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 OR2W5A6NFC9 320 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 H0YIG0 161 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 SGK494L7N484 410 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 EIF3FO00303 357 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 DNALI1O14645 258 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 PCDH17O14917 1159 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 SLC16A5O15375 505 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 OR1F1O43749 312 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 LCMT2O60294 686 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 BANF1O75531 89 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 JRKO75564 520 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 BMP10O95393 424 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 GUCA1CO95843 209 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 PRR35P0CG20 571 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 C8orf89P0DMQ9 161 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 NPPBP16860 134 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 TCP1P17987 556 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 FDXRP22570 491 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CCND1P24385 295 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 COL8A1P27658 744 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 IMPA1P29218 277 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 ELK3P41970 407 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 MAGEA3P43357 314 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CDKN2DP55273 166 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 RPS15AP62244 130 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 AP2B1P63010 937 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CSNK1G2P78368 415 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 DR1Q01658 176 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 FAM53BQ14153 422 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CSHL1Q14406 222 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CRYMQ14894 314 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 BTBD16Q32M84 506 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 TEDDM1Q5T9Z0 273 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 B3GNTL1Q67FW5 361 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 CAPN13Q6MZZ7 669 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 ASPGQ86U10 573 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 SLC26A11Q86WA9 606 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 IGDCC3Q8IVU1 814 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 LRRC56Q8IYG6 542 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 AGGF1Q8N302 714 aaeCLIP6.08□□□□□ -1.44
TCF4-228ENST00000565393 TBC1D19Q8N5T2 526 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 AMER3Q8N944 861 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CAMKVQ8NCB2 501 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 ST6GALNAC3Q8NDV1 305 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 ANP32BQ92688 251 aaKnown RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 HAS2Q92819 552 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 PYCR2Q96C36 320 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 LINGO1Q96FE5 620 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CERS2Q96G23 380 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 CAPZA3Q96KX2 299 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 NAT9Q9BTE0 207 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 TRIM31Q9BZY9 425 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 TGIF2Q9GZN2 237 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 ZNF700Q9H0M5 742 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 SYNPO2LQ9H987 977 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 RIC8BQ9NVN3 520 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 HCN3Q9P1Z3 774 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 C19orf25Q9UFG5 118 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 TEKT2Q9UIF3 430 aa6.08□□□□□ -1.44
TCF4-228ENST00000565393 ERRFI1Q9UJM3 462 aaPredicted RBP6.08□□□□□ -1.44
TCF4-228ENST00000565393 TRAV17A0A0B4J275 112 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 CES2O00748 559 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 P2RX6O15547 441 aa6.07□□□□□ -1.44
TCF4-228ENST00000565393 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 SEC24DO94855 1032 aaPredicted RBP6.07□□□□□ -1.44
TCF4-228ENST00000565393 RASAL1O95294 804 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms