RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ATG10Q9H0Y0 220 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 IMPAD1Q9NX62 359 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SPASTQ9UBP0 616 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PSORS1C1Q9UIG5 152 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 GRXCR2A6NFK2 248 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 NT5C1B-RDH14C9J2C7 533 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SLC28A1O00337 649 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SEMA3DO95025 777 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PRAMEF1O95521 474 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PTPN6P29350 595 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 ARPC4P59998 168 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SNRPD2P62316 118 aaKnown RBP19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MRPS6P82932 125 aaKnown RBP19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 GANABQ14697 944 aaKnown RBP19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 RFPL4BQ6ZWI9 263 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MTERF1Q99551 399 aaKnown RBP19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 TLR8Q9NR97 1041 aaKnown RBP19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 ARL15Q9NXU5 204 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 DUSP12Q9UNI6 340 aa19.85■□□□□ 0.77
MAP1LC3B-206ENST00000564844 CPNE3O75131 537 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 EIF2S1P05198 315 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 RPL9P32969 192 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 INO80DQ53TQ3 878 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 GLB1L3Q8NCI6 653 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 CCM2Q9BSQ5 444 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 GKN1Q9NS71 199 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PADI3Q9ULW8 664 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 FAM227AF5H4B4 570 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MEN1O00255 615 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 YY2O15391 372 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 FEN1P39748 380 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MAGEA2P43356 314 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 KIR3DL1P43629 444 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 ZNF544Q6NX49 715 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PAMR1Q6UXH9 720 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 DNAJC22Q8N4W6 341 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 ST6GAL2Q96JF0 529 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 COPS8Q99627 209 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 OR2B2Q9GZK3 357 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PDFQ9HBH1 243 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 FCF1Q9Y324 198 aaKnown RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 C5orf42Q9H799 3197 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 CLCA1A8K7I4 914 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 ESR1P03372 595 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MAD2L1Q13257 205 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 LINC00299Q6ZSB3 139 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 NLRP8Q86W28 1048 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 LSRQ86X29 649 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 LAX1Q8IWV1 398 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 KBTBD8Q8NFY9 601 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 IPCEF1Q8WWN9 437 aaPredicted RBP19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SH3KBP1Q96B97 665 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 SLC30A2Q9BRI3 323 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 KATNAL1Q9BW62 490 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 LYVE1Q9Y5Y7 322 aa19.84■□□□□ 0.77
MAP1LC3B-206ENST00000564844 STK16O75716 305 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 PTGER3P43115 390 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 E2F2Q14209 437 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 CLPPQ16740 277 aaPredicted RBP19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 FAM180BQ6P0A1 224 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 GLCCI1Q86VQ1 547 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 UBQLNLQ8IYU4 475 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 B3GNT7Q8NFL0 401 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 TMEM203Q969S6 136 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 HCSTQ9UBK5 93 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 MOSPD1Q9UJG1 213 aa19.83■□□□□ 0.77
MAP1LC3B-206ENST00000564844 TNFRSF11BO00300 401 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 WNT9AO14904 365 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CDK1P06493 297 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 WEE1P30291 646 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SOX6P35712 828 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 BCDIN3DQ7Z5W3 292 aaKnown RBP19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PTOV1Q86YD1 416 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZZZ3Q8IYH5 903 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 WDR36Q8NI36 951 aaKnown RBP19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MYDGFQ969H8 173 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PSKH2Q96QS6 385 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MGME1Q9BQP7 344 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TMEM121BQ9BXQ6 578 aaPredicted RBP19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PEX16Q9Y5Y5 336 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GREB1Q4ZG55 1949 aa19.83■□□□□ 0.76
MAP1LC3B-206ENST00000564844 IGLV3-10A0A075B6K4 115 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EFCAB10A6NFE3 127 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EPN2O95208 641 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 COX7A2P14406 83 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HSPA14Q0VDF9 509 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GDF6Q6KF10 455 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SYT12Q8IV01 421 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR7G1Q8NGA0 311 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CRISPLD1Q9H336 500 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RPRD1BQ9NQG5 326 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SCML2Q9UQR0 700 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FAM172BPA6NC97 362 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 K7ERQ8 282 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LRRTM2O43300 516 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CLDN9O95484 217 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 C9P02748 559 aa19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 C10orf62Q5T681 223 aaPredicted RBP19.82■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ADNP2Q6IQ32 1131 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms