RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RIC8BQ9NVN3 520 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 TAS2R13Q9NYV9 303 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
GTF3C1-204ENST00000564664 IGHV1-45A0A0A0MS14 117 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 DYTNA2CJ06 578 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 H7BY64 318 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 FOXS1O43638 330 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 WFS1O76024 890 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 HIST1H2AGP0C0S8 130 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 PRR35P0CG20 571 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 COX6A1P12074 109 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 HIST1H2ADP20671 130 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 IL10P22301 178 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 CDC16Q13042 620 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 SP140Q13342 867 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 PPP1R7Q15435 360 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 INAQ16352 499 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 HKDC1Q2TB90 917 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 RNASEH2BQ5TBB1 312 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 TMEM205Q6UW68 189 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 AMER3Q8N944 861 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 CAMKVQ8NCB2 501 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 C2CD4AQ8NCU7 369 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 HIST1H2AHQ96KK5 128 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 PRAP1Q96NZ9 151 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 OSBPL9Q96SU4 736 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 HIST1H2AJQ99878 128 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 TRIM56Q9BRZ2 755 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 H2AFJQ9BTM1 129 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 ZNF700Q9H0M5 742 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 CCDC177Q9NQR7 707 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 PCYOX1Q9UHG3 505 aa11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 TRMT6Q9UJA5 497 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 TSR3Q9UJK0 312 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 MRPS2Q9Y399 296 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-204ENST00000564664 TRAV17A0A0B4J275 112 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 HAT1O14929 419 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 NRP2O60462 931 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 KLHL18O94889 574 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 NSA2O95478 260 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 LDLRP01130 860 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 IMPA1P29218 277 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 GRK3P35626 688 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 SOX11P35716 441 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 ARG2P78540 354 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 CUL1Q13616 776 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 SPANXN3Q5MJ09 141 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 MAMDC2Q7Z304 686 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 CNTN4Q8IWV2 1026 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 CPNE9Q8IYJ1 553 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 PRSS58Q8IYP2 241 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 DTWD1Q8N5C7 304 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 BCORP1Q8N888 145 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 PPFIBP2Q8ND30 876 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 GRHL3Q8TE85 626 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 METTL21AQ8WXB1 218 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 SLCO2A1Q92959 643 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 HAUS8Q9BT25 410 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 TUBB6Q9BUF5 446 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 IARS2Q9NSE4 1012 aaKnown RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 STOX2Q9P2F5 926 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 C19orf25Q9UFG5 118 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 TEKT2Q9UIF3 430 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 ERRFI1Q9UJM3 462 aaPredicted RBP11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 NTNG1Q9Y2I2 539 aa11.56□□□□□ -0.56
GTF3C1-204ENST00000564664 UNC79Q9P2D8 2635 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 A0A0A6YYC8 382 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 I3L1I5 382 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CDK2AP1O14519 115 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 ALOX12BO75342 701 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 PER3P56645 1201 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 MPP1Q00013 466 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CRYMQ14894 314 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 NIPAL1Q6NVV3 410 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 FAM180AQ6UWF9 173 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 LINC00696Q6ZRV3 163 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 PIWIL4Q7Z3Z4 852 aaKnown RBP11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 C17orf64Q86WR6 236 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 MYO1HQ8N1T3 1032 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 AGGF1Q8N302 714 aaeCLIP11.55□□□□□ -0.566e-10■□□□□ 9
GTF3C1-204ENST00000564664 EEF1AKMT1Q8WVE0 214 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 ATL1Q8WXF7 558 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 PSMF1Q92530 271 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 C8orf44Q96CB5 159 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 TM4SF19Q96DZ7 209 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CNDP1Q96KN2 507 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 IMMP1LQ96LU5 166 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 RUNDC3BQ96NL0 473 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CYTH2Q99418 400 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 SARGQ9BW04 601 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 TRIM54Q9BYV2 358 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 MKL2Q9ULH7 1088 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 SNX12Q9UMY4 172 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 PDE10AQ9Y233 779 aa11.55□□□□□ -0.56
GTF3C1-204ENST00000564664 CSAG2Q9Y5P2 127 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms