RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 NXT1Q9UKK6 140 aaKnown RBP17.49■□□□□ 0.39
SYNGR3-204ENST00000564642 IKZF3Q9UKT9 509 aa17.49■□□□□ 0.39
SYNGR3-204ENST00000564642 NPEPPSL1A6NEC2 478 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 J3QKU1 62 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 PRPF4O43172 522 aaKnown RBP eCLIP17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 UMODP07911 640 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 ANXA5P08758 320 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 CDH1P12830 882 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 NR1D1P20393 614 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 SPRP35270 261 aaPredicted RBP17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 CSNK1G2P78368 415 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 KBTBD12Q3ZCT8 623 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 GRTP1Q5TC63 336 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 FRA10AC1Q70Z53 315 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 MRGPREQ86SM8 312 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 MMGT1Q8N4V1 131 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 PPM1NQ8N819 430 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 FBF1Q8TES7 1133 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 ANKRD49Q8WVL7 239 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 NACC2Q96BF6 587 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 THAP11Q96EK4 314 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 MVB12AQ96EY5 273 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 EGFL8Q99944 293 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 YIPF2Q9BWQ6 316 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 SOX17Q9H6I2 414 aaPredicted RBP17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 SYNPO2LQ9H987 977 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 CAB39LQ9H9S4 337 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 ZNF282Q9UDV7 671 aaPredicted RBP17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 ANAPC2Q9UJX6 822 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 PCDHGA9Q9Y5G4 932 aaKnown RBP17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 HECTD1Q9ULT8 2610 aa17.48■□□□□ 0.39
SYNGR3-204ENST00000564642 MED13Q9UHV7 2174 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 FEZF1A0PJY2 475 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CTAGE15A4D2H0 777 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 A6NL46 340 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 K7EM74 188 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CTAGE8P0CG41 777 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 STMN1P16949 149 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 FBLP22087 321 aaKnown RBP17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 PGDP52209 483 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 SHISA6Q6ZSJ9 500 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CTAGE6Q86UF2 777 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CTAGE4Q8IX94 777 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 TEX19Q8NA77 164 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CLEC1AQ8NC01 280 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 KIF18AQ8NI77 898 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 MIEF2Q96C03 454 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 MMABQ96EY8 250 aaPredicted RBP17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 GPR22Q99680 433 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 P4HTMQ9NXG6 502 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 CTSFQ9UBX1 484 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 MTRF1LQ9UGC7 380 aaKnown RBP17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 OARD1Q9Y530 152 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 TNRC6AQ8NDV7 1962 aaKnown RBP17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 ZNF462Q96JM2 2506 aa17.47■□□□□ 0.39
SYNGR3-204ENST00000564642 KCNE1BA0A087WTH5 132 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 VSTM2BA6NLU5 285 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 P2RX6O15547 441 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 CCDC166P0CW27 439 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 MMP11P24347 488 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 CCR8P51685 355 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 CDKL1Q00532 357 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 KLRB1Q12918 225 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 TSNQ15631 228 aaKnown RBP17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 PPP1R3AQ16821 1122 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 ZXDCQ2QGD7 858 aaPredicted RBP17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 CEP128Q6ZU80 1094 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 PPP1R32Q7Z5V6 425 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 ADAMTSL2Q86TH1 951 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 TBC1D19Q8N5T2 526 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 FDCSPQ8NFU4 85 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 STT3BQ8TCJ2 826 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 VPS50Q96JG6 964 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 OR4K3Q96R72 315 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 SPSB2Q99619 263 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 FAM129AQ9BZQ8 928 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 DERL2Q9GZP9 239 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 DRC3Q9H069 523 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 SEMA3GQ9NS98 782 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 ZDHHC18Q9NUE0 388 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 DYRK1BQ9Y463 629 aa17.46■□□□□ 0.39
SYNGR3-204ENST00000564642 A0A0A6YYC8 382 aaPredicted RBP17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 I3L1I5 382 aaPredicted RBP17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 AGPSO00116 658 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 PHGDHO43175 533 aaKnown RBP17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 CEACAM4O75871 244 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 STATHP02808 62 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 ZGLP1P0C6A0 271 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 AVPR1BP47901 424 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 HNMTP50135 292 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 NAB1Q13506 487 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 FAM53BQ14153 422 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 CSHL1Q14406 222 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 RBBP7Q16576 425 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 GLE1Q53GS7 698 aaKnown RBP17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 DCAF10Q5QP82 559 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 TMEM151BQ8IW70 566 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 PRSS58Q8IYP2 241 aa17.45■□□□□ 0.38
SYNGR3-204ENST00000564642 CAMKVQ8NCB2 501 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms