RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SNX19Q92543 992 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 NEIL2Q969S2 332 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 SH3KBP1Q96B97 665 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 ROPN1LQ96C74 230 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CMTM7Q96FZ5 175 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 MARK4Q96L34 752 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CAMK1GQ96NX5 476 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 OR4K3Q96R72 315 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CADM1Q9BY67 442 aaKnown RBP9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GSDMCQ9BYG8 508 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 TPSD1Q9BZJ3 242 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 KIR3DX1Q9H7L2 352 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PELI2Q9HAT8 420 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GPR27Q9NS67 375 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 BCAP29Q9UHQ4 241 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 PPT2Q9UMR5 302 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CCL27Q9Y4X3 112 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 GPR45Q9Y5Y3 372 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 AK5Q9Y6K8 562 aa9.36□□□□□ -0.91
UBFD1-202ENST00000563366 CCDC163A0A0D9SF12 145 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 FAM234BA2RU67 622 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 METTL12A8MUP2 240 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 MEI4A8MW99 385 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 H0Y8X5 98 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 FOXE1O00358 373 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 AIM2O14862 343 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 NRP2O60462 931 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SEC22BO75396 215 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RASSF9O75901 435 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 MYO1DO94832 1006 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 THEGLP0DJG4 465 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 JAK1P23458 1154 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 GSTM2P28161 218 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ADH6P28332 368 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 PKLRP30613 574 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 CPOXP36551 454 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ACTR1BP42025 376 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 PIK3CBP42338 1070 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RAP1GDS1P52306 607 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 CLNS1AP54105 237 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ACTR1AP61163 376 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RPL38P63173 70 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RACK1P63244 317 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ELF3P78545 371 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ABATP80404 500 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 FOXM1Q08050 763 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 DPY19L1Q2PZI1 675 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ALG11Q2TAA5 492 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 TRMT5Q32P41 509 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SPATS1Q496A3 300 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SPIN4Q56A73 249 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 PRMT9Q6P2P2 845 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 CYB5D1Q6P9G0 228 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 NXPE4Q6UWF7 544 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SCUBE1Q8IWY4 988 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RBM12BQ8IXT5 1001 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 LAS2Q8IYD9 372 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 LRRC56Q8IYG6 542 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 TBC1D19Q8N5T2 526 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 MFSD2AQ8NA29 543 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 PPFIBP2Q8ND30 876 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 WDR20Q8TBZ3 569 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 SLC22A18Q96BI1 424 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RCN3Q96D15 328 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 CXorf40BQ96DE9 158 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 KLHDC7BQ96G42 594 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 AIF1LQ9BQI0 150 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 COL25A1Q9BXS0 654 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 ACPTQ9BZG2 426 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 C12orf49Q9H741 205 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 AASDHPPTQ9NRN7 309 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 GID8Q9NWU2 228 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 VPS29Q9UBQ0 182 aa9.35□□□□□ -0.91
UBFD1-202ENST00000563366 RUVBL1Q9Y265 456 aaKnown RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 TP53BP1Q12888 1972 aaPredicted RBP9.35□□□□□ -0.91
UBFD1-202ENST00000563366 KIR2DS5A0A0G2JLQ3 304 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 A0A0G2JNG1 304 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 A0A1W2PP18 115 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 PIPSLA2A3N6 862 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 FAM221BA6H8Z2 402 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 CCDC154A6NI56 674 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 KIR2DS3K7RE56 304 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 NR5A2O00482 541 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 MRASO14807 208 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 RECKO95980 971 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 LMNAP02545 664 aaKnown RBP9.34□□□□□ -0.91
UBFD1-202ENST00000563366 CTSEP14091 401 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 ITGAXP20702 1163 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 CD38P28907 300 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 HOXA6P31267 233 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 GRK3P35626 688 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 CCR8P51685 355 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 POLR2JP52435 117 aaKnown RBP9.34□□□□□ -0.91
UBFD1-202ENST00000563366 DIO3P55073 304 aa9.34□□□□□ -0.91
UBFD1-202ENST00000563366 RPL6Q02878 288 aaKnown RBP9.34□□□□□ -0.91
UBFD1-202ENST00000563366 ACSM2AQ08AH3 577 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms