RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ESAMQ96AP7 390 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CLIP3Q96DZ5 547 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 TM4SF19Q96DZ7 209 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 C10orf90Q96M02 699 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 HAUS8Q9BT25 410 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 SARGQ9BW04 601 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NMRAL1Q9HBL8 299 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 CUTCQ9NTM9 273 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBR1-204ENST00000563239 PTBP2Q9UKA9 531 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 SLC22A14Q9Y267 594 aa8.16□□□□□ -1.1
UBR1-204ENST00000563239 V9GYY5 206 aaPredicted RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 SMG1Q96Q15 3661 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 HELZ2Q9BYK8 2649 aaKnown RBP8.16□□□□□ -1.1
UBR1-204ENST00000563239 ANKRD12Q6UB98 2062 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 HEATR5BQ9P2D3 2071 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 PIEZO2Q9H5I5 2752 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 EXOC1LA0A1B0GW35 172 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 A0A1B0GX78 115 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 FEZF1A0PJY2 475 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 HYKKA2RU49 373 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 UBXN8O00124 270 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 DSCR3O14972 297 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 KERAO60938 352 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 KATNA1O75449 491 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 KLF7O75840 302 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 KLHL2O95198 593 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 STATHP02808 62 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 EIF2S1P05198 315 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 KLK3P07288 261 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 RAB40ALP0C0E4 278 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 SBK3P0C264 359 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 CNTFP26441 200 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 PTPN4P29074 926 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 DEKP35659 375 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 GLRBP48167 497 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 AGTR2P50052 363 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 CCR8P51685 355 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 EMP3P54852 163 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 FOXL2P58012 376 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 MEF2AQ02078 507 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 IL10RAQ13651 578 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 GRM7Q14831 915 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 LINC00303Q3SY05 128 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 NKAIN1Q4KMZ8 207 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 YOD1Q5VVQ6 348 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 SULT1C3Q6IMI6 304 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 WDR93Q6P2C0 686 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 NXPE4Q6UWF7 544 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 TIFABQ6ZNK6 161 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 TTLL10Q6ZVT0 673 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 FRA10AC1Q70Z53 315 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 COX15Q7KZN9 410 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 ADCK2Q7Z695 626 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 CCDC91Q7Z6B0 441 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 TBC1D1Q86TI0 1168 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 SHISA5Q8N114 240 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 CSNK1A1LQ8N752 337 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 ENDOVQ8N8Q3 282 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 RHEBL1Q8TAI7 183 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 STAG3L4Q8TBR4 150 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 PROKR1Q8TCW9 393 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 AENQ8WTP8 325 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 SLC5A11Q8WWX8 675 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBR1-204ENST00000563239 STARD8Q92502 1023 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 KIAA1143Q96AT1 154 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 TSNARE1Q96NA8 513 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 BBC3Q96PG8 261 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 EGFL8Q99944 293 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 MACROD1Q9BQ69 325 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 DPH2Q9BQC3 489 aaPredicted RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 NDC1Q9BTX1 674 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 GPR87Q9BY21 358 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 NLNQ9BYT8 704 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 VPS11Q9H270 941 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 ACTL8Q9H568 366 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 FETUBQ9UGM5 382 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 TLK1Q9UKI8 766 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 RNF112Q9ULX5 631 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 SRPK3Q9UPE1 567 aa8.15□□□□□ -1.1
UBR1-204ENST00000563239 RUVBL1Q9Y265 456 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 FARSAQ9Y285 508 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 MRPS2Q9Y399 296 aaKnown RBP8.15□□□□□ -1.1
UBR1-204ENST00000563239 PCSK5Q92824 1860 aa8.15□□□□□ -1.11
UBR1-204ENST00000563239 ZNF891A8MT65 544 aaPredicted RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 FOXO6A8MYZ6 492 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 MAP2K7O14733 419 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 FOXS1O43638 330 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 KLK8O60259 260 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 CREG1O75629 220 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 KRT38O76015 456 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 WDR47O94967 919 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 RECKO95980 971 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 SNRPAP09012 282 aaKnown RBP8.14□□□□□ -1.11
UBR1-204ENST00000563239 PRKAR1AP10644 381 aa8.14□□□□□ -1.11
UBR1-204ENST00000563239 ALAS2P22557 587 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms