RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PRAMEF14Q5SWL7 426 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 PRAMEF13Q5VWM6 474 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 MSANTD1Q6ZTZ1 278 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 RAD51AP1Q96B01 352 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 FAM120BQ96EK7 910 aaKnown RBP18.42■□□□□ 0.54
SMPD3-203ENST00000563226 GDF15Q99988 308 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 EFCAB11Q9BUY7 163 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 OSBPL11Q9BXB4 747 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 DMRT3Q9NQL9 472 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 UTS2RQ9UKP6 389 aa18.42■□□□□ 0.54
SMPD3-203ENST00000563226 FPGTO14772 594 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 SCAMP2O15127 329 aaKnown RBP18.41■□□□□ 0.54
SMPD3-203ENST00000563226 ADAM23O75077 832 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 MYO1DO94832 1006 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 TGFB1P01137 390 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 GBAP04062 536 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 SMIM18P0DKX4 95 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 KELP23276 732 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 TIA1P31483 386 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMPD3-203ENST00000563226 TRIM23P36406 574 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 SRSF11Q05519 484 aaKnown RBP18.41■□□□□ 0.54
SMPD3-203ENST00000563226 DUOXA1Q1HG43 343 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 ARMCX6Q7L4S7 300 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 SPRED1Q7Z699 444 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 OR14C36Q8NHC7 312 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 METTL2AQ96IZ6 378 aaKnown RBP18.41■□□□□ 0.54
SMPD3-203ENST00000563226 MYCBPQ99417 103 aaPredicted RBP18.41■□□□□ 0.54
SMPD3-203ENST00000563226 OR51B5Q9H339 312 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 CLDND1Q9NY35 253 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 LIMD1Q9UGP4 676 aa18.41■□□□□ 0.54
SMPD3-203ENST00000563226 A0A1W2PQU0 124 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PCDH7O60245 1069 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 LDLRP01130 860 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 EGFP01133 1207 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 C21orf58P58505 322 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 DPY19L1Q2PZI1 675 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 SPIN4Q56A73 249 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 CHST15Q7LFX5 561 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-203ENST00000563226 CARM1Q86X55 608 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 ST13P4Q8IZP2 240 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-203ENST00000563226 OR8J2Q8NGG1 315 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 OR5K2Q8NHB8 316 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 SH3KBP1Q96B97 665 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 REPS1Q96D71 796 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 RIPOR3Q96MK2 946 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PANX1Q96RD7 426 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 EHD1Q9H4M9 534 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 FZD3Q9NPG1 666 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 EXO1Q9UQ84 846 aaKnown RBP18.4■□□□□ 0.54
SMPD3-203ENST00000563226 WDR37Q9Y2I8 494 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 BRWD1Q9NSI6 2320 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 GABRR3A8MPY1 467 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 EI24O14681 340 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 KMOO15229 486 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PI15O43692 258 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 GMNNO75496 209 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 CPSF4O95639 269 aaKnown RBP18.4■□□□□ 0.54
SMPD3-203ENST00000563226 ACP5P13686 325 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PCSK2P16519 638 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 NTSR1P30989 418 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 CLCNKAP51800 687 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 TXNL4AP83876 142 aaKnown RBP18.4■□□□□ 0.54
SMPD3-203ENST00000563226 HTR4Q13639 388 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PAGE2BQ5JRK9 111 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 IYDQ6PHW0 289 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 PACRGLQ8N7B6 248 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 IL17RCQ8NAC3 791 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 TNIP2Q8NFZ5 429 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 WDR48Q8TAF3 677 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 FAM162AQ96A26 154 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 VPS50Q96JG6 964 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 MENTQ9BUN1 341 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 C9orf16Q9BUW7 83 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 NTN4Q9HB63 628 aa18.4■□□□□ 0.54
SMPD3-203ENST00000563226 A0A1B0GTW7 788 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 GNG14A0A1W2PPG7 69 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 A0A1W2PQF6 199 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 FOXE1O00358 373 aaPredicted RBP18.39■□□□□ 0.53
SMPD3-203ENST00000563226 RASAL1O95294 804 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 RAP2AP10114 183 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 ERGP11308 486 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 NELFEP18615 380 aaKnown RBP18.39■□□□□ 0.53
SMPD3-203ENST00000563226 MAT2AP31153 395 aaKnown RBP18.39■□□□□ 0.53
SMPD3-203ENST00000563226 LTBRP36941 435 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 TMTC4Q5T4D3 741 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 IER5LQ5T953 404 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 TBPL2Q6SJ96 375 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 LCTLQ6UWM7 567 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 COMMD6Q7Z4G1 85 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 VN1R5Q7Z5H4 357 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 NETO1Q8TDF5 533 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 NCLNQ969V3 563 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 GABRG3Q99928 467 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 MYOCQ99972 504 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 DUSP26Q9BV47 211 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 C1QTNF2Q9BXJ5 285 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 YY1AP1Q9H869 796 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 PLEKHM1Q9Y4G2 1056 aa18.39■□□□□ 0.53
SMPD3-203ENST00000563226 RNF103-CHMP3A0A140T963 221 aa18.38■□□□□ 0.53
SMPD3-203ENST00000563226 UPK1AO00322 258 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms