RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 C1GALT1C1LP0DN25 315 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CTSOP43234 321 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 GSTM5P46439 218 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 RFX3P48380 749 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 GSSP48637 474 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 SMAD4Q13485 552 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 TDGQ13569 410 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MPP2Q14168 576 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 UNC50Q53HI1 259 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 IYDQ6PHW0 289 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ISCA2Q86U28 154 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 FAM13CQ8NE31 585 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MDGA1Q8NFP4 955 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 SP7Q8TDD2 431 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TIMM29Q9BSF4 260 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 EPHX3Q9H6B9 360 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ANKHQ9HCJ1 492 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TAC3Q9UHF0 121 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 OR10H1Q9Y4A9 318 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 AQP12BA6NM10 295 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 C5orf67F2Z3F1 127 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CCRL2O00421 344 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ETS2P15036 469 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ETV4P43268 484 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PWP1Q13610 501 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CDHR3Q6ZTQ4 885 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 AQP12AQ8IXF9 295 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ELMOD2Q8IZ81 293 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MAPK15Q8TD08 544 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CD200R1Q8TD46 325 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TPD52L3Q96J77 140 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 DACH2Q96NX9 599 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PIF1Q9H611 641 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 EPS8L2Q9H6S3 715 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 LYARQ9NX58 379 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 GPN3Q9UHW5 284 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 PLXNA1Q9UIW2 1896 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 DOCK3Q8IZD9 2030 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 C17orf113A0A1B0GUU1 675 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 SAC3D1A6NKF1 404 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 DUXAA6NLW8 204 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 H3BQ06 376 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 SNNO75324 88 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 DLGAP3O95886 979 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 JUPP14923 745 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 IL12RB1P42701 662 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PREPP48147 710 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ARCN1P48444 511 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 PRKAG1P54619 331 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 LIPEQ05469 1076 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TOP3AQ13472 1001 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 DENND5AQ6IQ26 1287 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 DUS1LQ6P1R4 473 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 USP30Q70CQ3 517 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 BNIPLQ7Z465 357 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.32□□□□□ -1.24
TCF4-216ENST00000562680 DCBLD1Q8N8Z6 715 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 FBXO30Q8TB52 745 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 HDAC2Q92769 488 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 PHF21AQ96BD5 680 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PYCR2Q96C36 320 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 EBF4Q9BQW3 602 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 LRRC3Q9BY71 257 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 NEUROD4Q9HD90 331 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CYP8B1Q9UNU6 501 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 COPG1Q9Y678 874 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 DGKBQ9Y6T7 804 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 A0A1W2PQ72 361 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 C2orf74A8MZ97 194 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 AP3D1O14617 1153 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CLOCKO15516 846 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 LAMTOR5O43504 91 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PIM1P11309 404 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 CSNK2A2P19784 350 aaPredicted RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 CR2P20023 1033 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 MAPK10P53779 464 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.24
TCF4-216ENST00000562680 FAM174BQ3ZCQ3 159 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CCDC157Q569K6 752 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 COQ5Q5HYK3 327 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 TMEM214Q6NUQ4 689 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 AKAP14Q86UN6 197 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PQLC1Q8N2U9 271 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 GPR26Q8NDV2 337 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ISL2Q96A47 359 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PPM1MQ96MI6 270 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PBX4Q9BYU1 374 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 ALG2Q9H553 416 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 PDFQ9HBH1 243 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 RPRD1BQ9NQG5 326 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 TAS2R1Q9NYW7 299 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 CCDC59Q9P031 241 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 SUCOQ9UBS9 1254 aaKnown RBP7.32□□□□□ -1.24
TCF4-216ENST00000562680 SPATA2Q9UM82 520 aa7.32□□□□□ -1.24
TCF4-216ENST00000562680 BRCA1P38398 1863 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms